Variant report

Variant	rs55713306
Chromosome Location	chr15:82691453-82691454
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:34 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1054025	chr15:82540486-83058214	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
2	esv3414396	chr15:82581647-82777145	Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS	TF binding region CpG island lncRNA	10 gene(s)	inside rSNPs	diseases
3	esv3512406	chr15:82581647-82787145	Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription	TF binding region CpG island lncRNA	10 gene(s)	inside rSNPs	diseases
4	esv3512407	chr15:82581647-82787145	Bivalent/Poised TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh	TF binding region CpG island lncRNA	10 gene(s)	inside rSNPs	diseases
5	nsv904446	chr15:82599306-82828113	Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island lncRNA	13 gene(s)	inside rSNPs	diseases
6	nsv510669	chr15:82600766-83011258	Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island lncRNA	21 gene(s)	inside rSNPs	diseases
7	esv1820106	chr15:82606410-83202155	Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island lncRNA	31 gene(s)	inside rSNPs	diseases
8	nsv1053566	chr15:82606410-83204498	Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island lncRNA	32 gene(s)	inside rSNPs	diseases
9	nsv976957	chr15:82615006-82692689	Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island lncRNA	4 gene(s)	inside rSNPs	diseases
10	esv33165	chr15:82664410-83041871	Active TSS Enhancers Weak transcription	TF binding region CpG island lncRNA	22 gene(s)	inside rSNPs	diseases
11	esv1817211	chr15:82669868-82736385	Enhancers	TF binding region lncRNA	4 gene(s)	inside rSNPs	diseases
12	nsv1046321	chr15:82680087-83202155	Enhancers Active TSS Weak transcription	TF binding region CpG island lncRNA	29 gene(s)	inside rSNPs	diseases
13	esv1849257	chr15:82680276-82745817	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
14	esv1850044	chr15:82680624-82724903	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
15	esv1795057	chr15:82680824-82720107	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
16	esv1804615	chr15:82680824-82720107	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
17	esv1828385	chr15:82680824-82720107	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
18	esv1843280	chr15:82680824-82720107	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
19	esv1820227	chr15:82680824-82754250	Enhancers	TF binding region lncRNA	5 gene(s)	inside rSNPs	diseases
20	esv1809536	chr15:82682724-82721188	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
21	esv1827119	chr15:82682724-82721188	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
22	esv16849	chr15:82683298-82721889	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
23	esv1851464	chr15:82683798-82720107	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
24	esv1824290	chr15:82683798-82748496	Enhancers	TF binding region lncRNA	4 gene(s)	inside rSNPs	diseases
25	esv1798910	chr15:82684250-82721188	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
26	esv1800026	chr15:82684250-82721188	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
27	esv1809591	chr15:82684250-82721188	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
28	esv1815855	chr15:82684250-82721188	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
29	esv1831757	chr15:82684250-82721188	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
30	esv1846692	chr15:82684250-82721188	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
31	esv1798101	chr15:82684450-82720107	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
32	esv1848213	chr15:82687963-82718047	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
33	esv1796865	chr15:82689657-82719179	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
34	esv1803624	chr15:82689657-82736385	Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:82691400-82691600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links