The 2.0 version of rSNPBase

Variant report

Variant rs557162481
Chromosome Location chr3:17033711-17033712
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17014800-17038800 Weak transcription Primary B cells from cord blood blood
2 chr3:17020400-17034000 Weak transcription Small Intestine intestine
3 chr3:17024200-17034200 Weak transcription Primary monocytes fromperipheralblood blood
4 chr3:17025400-17033800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr3:17026800-17041200 Enhancers Primary T helper cells PMA-I stimulated --
6 chr3:17027200-17033800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr3:17027200-17033800 Weak transcription Fetal Heart heart
8 chr3:17027200-17035400 Weak transcription Fetal Brain Female brain
9 chr3:17027600-17033800 Weak transcription Gastric stomach
10 chr3:17027600-17034000 Weak transcription Right Atrium heart
11 chr3:17027800-17034400 Weak transcription Ovary ovary
12 chr3:17028400-17039600 Enhancers Primary T killer naive cells fromperipheralblood blood
13 chr3:17029000-17033800 Weak transcription Spleen Spleen
14 chr3:17029000-17034000 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr3:17029000-17034400 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr3:17029200-17034400 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr3:17029400-17034200 Weak transcription Liver Liver
18 chr3:17029400-17042200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr3:17030000-17036200 Weak transcription Primary hematopoietic stem cells blood
20 chr3:17030200-17035800 Weak transcription Brain Anterior Caudate brain
21 chr3:17030200-17039200 Enhancers Primary T helper naive cells from peripheral blood blood
22 chr3:17030600-17034600 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr3:17031200-17038200 Enhancers Primary T helper 17 cells PMA-I stimulated --
24 chr3:17031600-17035000 Enhancers Primary Natural Killer cells fromperipheralblood blood
25 chr3:17031800-17035000 Enhancers Primary T cells fromperipheralblood blood
26 chr3:17031800-17041200 Enhancers Primary T helper cells fromperipheralblood blood
27 chr3:17032600-17033800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr3:17032600-17036400 Weak transcription Fetal Intestine Small intestine
29 chr3:17032600-17037600 Weak transcription Lung lung
30 chr3:17032800-17033800 Weak transcription Left Ventricle heart
31 chr3:17032800-17033800 Weak transcription Psoas Muscle Psoas
32 chr3:17032800-17033800 Weak transcription Right Ventricle heart
33 chr3:17032800-17036400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr3:17032800-17036600 Enhancers Primary T killer memory cells from peripheral blood blood
35 chr3:17033000-17033800 Weak transcription Primary B cells from peripheral blood blood
36 chr3:17033400-17033800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr3:17033400-17034800 Enhancers Pancreas Pancrea
38 chr3:17033400-17036400 Weak transcription Thymus Thymus
39 chr3:17033400-17040200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
40 chr3:17033600-17033800 Enhancers GM12878-XiMat blood
41 chr3:17033600-17036000 Genic enhancers Primary T cells from cord blood blood
42 chr3:17033600-17038200 Enhancers Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015