Variant report

Variant	rs557190382
Chromosome Location	chr3:157031539-157031540
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877687	chr3:156924793-157044184	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv3358398	chr3:157030558-157035856	Enhancers Weak transcription Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:157013000-157032600	Weak transcription	NH-A	brain
2	chr3:157015600-157048400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr3:157021800-157035400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr3:157030400-157032600	Weak transcription	HSMM	muscle
5	chr3:157030400-157036200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr3:157030600-157035400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr3:157030600-157035400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr3:157030600-157035400	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr3:157030600-157035400	Weak transcription	NHDF-Ad	bronchial
10	chr3:157030600-157035400	Weak transcription	NHLF	lung
11	chr3:157030600-157047000	Weak transcription	Osteobl	bone
12	chr3:157030800-157031800	Strong transcription	HUVEC	blood vessel
13	chr3:157031400-157031600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr3:157031400-157031800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr3:157031400-157037400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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