The 2.0 version of rSNPBase

Variant report

Variant rs557192070
Chromosome Location chr13:30831705-30831706
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30799600-30845200 Weak transcription HMEC breast
2 chr13:30805600-30841800 Weak transcription Ovary ovary
3 chr13:30805600-30853200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr13:30810600-30849200 Weak transcription Fetal Muscle Trunk muscle
5 chr13:30813000-30849000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr13:30820600-30831800 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr13:30820600-30831800 Weak transcription HSMMtube muscle
8 chr13:30822400-30833600 Weak transcription K562 blood
9 chr13:30822800-30834000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr13:30823600-30849200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr13:30823600-30849200 Weak transcription HSMM muscle
12 chr13:30823800-30833800 Weak transcription NHEK skin
13 chr13:30823800-30849200 Weak transcription Fetal Brain Female brain
14 chr13:30824000-30832000 Weak transcription Fetal Kidney kidney
15 chr13:30824000-30832000 Weak transcription Osteobl bone
16 chr13:30824000-30833400 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr13:30824000-30845200 Weak transcription Thymus Thymus
18 chr13:30824000-30848800 Weak transcription Fetal Muscle Leg muscle
19 chr13:30824200-30849200 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr13:30824400-30831800 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr13:30824400-30849200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr13:30824600-30833400 Weak transcription Pancreas Pancrea
23 chr13:30824800-30832800 Strong transcription Dnd41 blood
24 chr13:30825000-30831800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr13:30825000-30831800 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr13:30826800-30860400 Weak transcription Esophagus oesophagus
27 chr13:30827400-30833600 Weak transcription Primary T cells fromperipheralblood blood
28 chr13:30828200-30831800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr13:30828200-30833400 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr13:30828200-30837000 Weak transcription HUVEC blood vessel
31 chr13:30828200-30849000 Weak transcription Muscle Satellite Cultured Cells --
32 chr13:30828400-30848800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr13:30828600-30857600 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr13:30829400-30831800 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr13:30829600-30845200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr13:30829600-30845200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr13:30829600-30848800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr13:30829800-30847400 Weak transcription Primary hematopoietic stem cells blood
39 chr13:30829800-30850000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr13:30830400-30832600 Enhancers Fetal Heart heart
41 chr13:30830600-30832000 Weak transcription A549 lung
42 chr13:30830600-30832400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr13:30830800-30832200 Enhancers HUES48 Cell Line embryonic stem cell
44 chr13:30830800-30832600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr13:30831000-30832600 Enhancers Brain Cingulate Gyrus brain
46 chr13:30831000-30832600 Enhancers Colon Smooth Muscle Colon
47 chr13:30831000-30833600 Weak transcription Fetal Intestine Small intestine
48 chr13:30831200-30831800 Weak transcription Fetal Stomach stomach
49 chr13:30831200-30832200 Enhancers iPS-18 Cell Line embryonic stem cell
50 chr13:30831200-30832400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015