Variant report

Variant rs55720227
Chromosome Location chr4:129107049-129107050
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:129067000-129107600 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr4:129077400-129112600 Weak transcription Left Ventricle heart
3 chr4:129077400-129122000 Weak transcription Aorta Aorta
4 chr4:129077600-129120600 Weak transcription Fetal Muscle Trunk muscle
5 chr4:129078000-129107800 Weak transcription Fetal Intestine Small intestine
6 chr4:129078000-129107800 Weak transcription Fetal Stomach stomach
7 chr4:129078000-129108000 Weak transcription Gastric stomach
8 chr4:129083600-129112600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr4:129084800-129107800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr4:129084800-129112400 Weak transcription NHDF-Ad bronchial
11 chr4:129092600-129107800 Weak transcription Pancreas Pancrea
12 chr4:129092600-129122000 Weak transcription Esophagus oesophagus
13 chr4:129093800-129107800 Weak transcription H1 Cell Line embryonic stem cell
14 chr4:129094400-129107200 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr4:129094600-129107800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr4:129094600-129122200 Weak transcription Rectal Smooth Muscle rectum
17 chr4:129094600-129131000 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr4:129094800-129107800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr4:129095000-129108400 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr4:129095000-129112400 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr4:129096200-129107800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr4:129096600-129107800 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr4:129096600-129112600 Weak transcription GM12878-XiMat blood
24 chr4:129096600-129121200 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr4:129096800-129108000 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr4:129097400-129112400 Weak transcription Muscle Satellite Cultured Cells --
27 chr4:129097600-129112600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr4:129098200-129119600 Weak transcription Fetal Lung lung
29 chr4:129098400-129124000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr4:129098400-129141200 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr4:129098600-129107800 Weak transcription Lung lung
32 chr4:129098600-129112400 Weak transcription HSMM muscle
33 chr4:129098800-129122400 Weak transcription HUVEC blood vessel
34 chr4:129099000-129112400 Weak transcription K562 blood
35 chr4:129099000-129112400 Weak transcription Osteobl bone
36 chr4:129099000-129125000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr4:129099400-129108000 Weak transcription Ovary ovary
38 chr4:129100200-129107800 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr4:129100200-129129400 Weak transcription HepG2 liver
40 chr4:129101000-129107600 Weak transcription Fetal Thymus thymus
41 chr4:129101200-129107800 Weak transcription Brain Inferior Temporal Lobe brain
42 chr4:129102800-129107800 Weak transcription Liver Liver
43 chr4:129102800-129121000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr4:129103600-129111600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr4:129103600-129129800 Weak transcription Placenta Amnion Placenta Amnion
46 chr4:129103800-129131600 Weak transcription NHLF lung
47 chr4:129104400-129112600 Weak transcription HSMMtube muscle
48 chr4:129104600-129107800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr4:129104600-129108000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr4:129104600-129108000 Weak transcription Fetal Muscle Leg muscle

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