Variant report

Variant	rs557206715
Chromosome Location	chr4:18401730-18401731
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1003931	chr4:18241575-18849898	Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv533087	chr4:18362040-19176896	Enhancers Bivalent Enhancer ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	esv3384596	chr4:18401427-18401992	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:18391600-18404800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr4:18393400-18403000	Weak transcription	Small Intestine	intestine
3	chr4:18396800-18403000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr4:18399000-18401800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr4:18399400-18401800	Enhancers	Brain Germinal Matrix	brain
6	chr4:18400600-18404400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr4:18400800-18401800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr4:18401400-18408800	Enhancers	Fetal Intestine Large	intestine
9	chr4:18401400-18409200	Enhancers	Fetal Intestine Small	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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