Variant report

Variant rs55724176
Chromosome Location chr2:86427182-86427183
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86425600-86427200 Active TSS Primary T helper cells PMA-I stimulated --
2 chr2:86425600-86427200 Active TSS Skeletal Muscle Male skeletal muscle
3 chr2:86425800-86427200 Active TSS Brain Hippocampus Middle brain
4 chr2:86425800-86427200 Active TSS Colon Smooth Muscle Colon
5 chr2:86425800-86427200 Active TSS Fetal Brain Female brain
6 chr2:86425800-86427400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr2:86425800-86427400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr2:86425800-86427400 Active TSS Stomach Smooth Muscle stomach
9 chr2:86425800-86427800 Active TSS NH-A brain
10 chr2:86425800-86428200 Active TSS A549 lung
11 chr2:86425800-86429800 Active TSS GM12878-XiMat blood
12 chr2:86426000-86427200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr2:86426000-86427200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr2:86426000-86427200 Active TSS Primary hematopoietic stem cells short term culture blood
15 chr2:86426000-86427200 Active TSS Cortex derived primary cultured neurospheres brain
16 chr2:86426000-86427200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
17 chr2:86426000-86427200 Active TSS Brain Cingulate Gyrus brain
18 chr2:86426000-86427200 Active TSS Duodenum Smooth Muscle Duodenum
19 chr2:86426000-86427200 Active TSS Pancreas Pancrea
20 chr2:86426000-86427200 Active TSS Rectal Mucosa Donor 29 rectum
21 chr2:86426000-86427200 Active TSS Dnd41 blood
22 chr2:86426000-86427400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
23 chr2:86426000-86427400 Active TSS Breast Myoepithelial Primary Cells Breast
24 chr2:86426000-86427400 Active TSS Muscle Satellite Cultured Cells --
25 chr2:86426000-86427400 Active TSS Hela-S3 cervix
26 chr2:86426000-86427600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
27 chr2:86426000-86427600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
28 chr2:86426000-86427600 Active TSS Fetal Intestine Large intestine
29 chr2:86426000-86427600 Active TSS Right Atrium heart
30 chr2:86426000-86427600 Active TSS Thymus Thymus
31 chr2:86426000-86427600 Active TSS HSMM muscle
32 chr2:86426000-86427800 Active TSS H1 Cell Line embryonic stem cell
33 chr2:86426000-86427800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr2:86426000-86427800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr2:86426000-86427800 Active TSS HUES6 Cell Line embryonic stem cell
36 chr2:86426000-86427800 Active TSS Brain Germinal Matrix brain
37 chr2:86426000-86427800 Active TSS Right Ventricle heart
38 chr2:86426000-86428200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr2:86426000-86428400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
40 chr2:86426200-86427200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
41 chr2:86426200-86427200 Active TSS Primary T killer memory cells from peripheral blood blood
42 chr2:86426200-86427200 Active TSS Brain Angular Gyrus brain
43 chr2:86426200-86427200 Active TSS Brain Anterior Caudate brain
44 chr2:86426200-86427200 Active TSS Esophagus oesophagus
45 chr2:86426200-86427200 Active TSS Fetal Kidney kidney
46 chr2:86426200-86427200 Active TSS Pancreatic Islets Pancreatic Islet
47 chr2:86426200-86427200 Active TSS Lung lung
48 chr2:86426200-86427200 Active TSS Rectal Mucosa Donor 31 rectum
49 chr2:86426200-86427200 Active TSS Sigmoid Colon Sigmoid Colon
50 chr2:86426200-86427200 Active TSS Small Intestine intestine

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