Variant report

Variant rs55728587
Chromosome Location chr4:843674-843675
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:833600-850400 Weak transcription HMEC breast
2 chr4:834600-850600 Weak transcription HSMMtube muscle
3 chr4:835200-843800 Weak transcription H9 Cell Line embryonic stem cell
4 chr4:835800-850800 Weak transcription Fetal Brain Male brain
5 chr4:836400-843800 Weak transcription Brain Substantia Nigra brain
6 chr4:839400-844400 Weak transcription HSMM muscle
7 chr4:839400-850400 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr4:839600-853600 Weak transcription K562 blood
9 chr4:839600-856600 Weak transcription Fetal Kidney kidney
10 chr4:839800-848800 Weak transcription Primary hematopoietic stem cells blood
11 chr4:839800-850400 Weak transcription NH-A brain
12 chr4:839800-851000 Weak transcription NHDF-Ad bronchial
13 chr4:839800-860600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr4:840000-846600 Weak transcription Osteobl bone
15 chr4:840000-849800 Weak transcription Stomach Mucosa stomach
16 chr4:840200-843800 Weak transcription HUVEC blood vessel
17 chr4:840200-850800 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr4:840400-846000 Weak transcription Fetal Lung lung
19 chr4:840400-850600 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr4:840400-860600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr4:840600-856000 Weak transcription Psoas Muscle Psoas
22 chr4:840800-856200 Strong transcription Fetal Stomach stomach
23 chr4:840800-856400 Strong transcription Fetal Intestine Small intestine
24 chr4:841200-845400 Strong transcription Muscle Satellite Cultured Cells --
25 chr4:841200-845400 Strong transcription Brain Cingulate Gyrus brain
26 chr4:841200-846200 Strong transcription HUES6 Cell Line embryonic stem cell
27 chr4:841200-847200 Strong transcription Skeletal Muscle Female skeletal muscle
28 chr4:841200-847400 Strong transcription Brain Anterior Caudate brain
29 chr4:841200-847800 Strong transcription Fetal Brain Female brain
30 chr4:841200-848400 Strong transcription Rectal Mucosa Donor 31 rectum
31 chr4:841200-849000 Strong transcription Adipose Nuclei Adipose
32 chr4:841200-849600 Strong transcription Skeletal Muscle Male skeletal muscle
33 chr4:841200-850000 Strong transcription Gastric stomach
34 chr4:841200-856600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr4:841200-856600 Strong transcription Liver Liver
36 chr4:841200-860400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr4:841200-861200 Strong transcription Brain Inferior Temporal Lobe brain
38 chr4:841200-862600 Strong transcription Esophagus oesophagus
39 chr4:841200-872800 Strong transcription Rectal Mucosa Donor 29 rectum
40 chr4:841200-881200 Strong transcription Brain Germinal Matrix brain
41 chr4:841200-881200 Strong transcription Duodenum Mucosa Duodenum
42 chr4:841200-898600 Strong transcription Cortex derived primary cultured neurospheres brain
43 chr4:841200-898800 Strong transcription Placenta Placenta
44 chr4:841200-901400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr4:841200-906000 Strong transcription Stomach Smooth Muscle stomach
46 chr4:841400-844200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
47 chr4:841400-844400 Genic enhancers Spleen Spleen
48 chr4:841400-845400 Strong transcription NHEK skin
49 chr4:841400-847600 Strong transcription Right Ventricle heart
50 chr4:841400-848400 Strong transcription Colonic Mucosa Colon

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