Variant report

Variant rs557551051
Chromosome Location chr3:195682108-195682109
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195659600-195685600 Weak transcription Small Intestine intestine
2 chr3:195665200-195691800 Weak transcription HSMMtube muscle
3 chr3:195665400-195685200 Weak transcription Aorta Aorta
4 chr3:195667400-195684200 Weak transcription Spleen Spleen
5 chr3:195667400-195686200 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr3:195668200-195682200 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr3:195677800-195691800 Weak transcription NHDF-Ad bronchial
8 chr3:195678000-195696200 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr3:195679000-195691600 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr3:195679000-195695800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr3:195680600-195682600 Active TSS Hela-S3 cervix
12 chr3:195680600-195682800 Active TSS HUES48 Cell Line embryonic stem cell
13 chr3:195680600-195682800 Active TSS iPS-18 Cell Line embryonic stem cell
14 chr3:195680800-195682400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
15 chr3:195681000-195682200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr3:195681000-195682200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr3:195681000-195682200 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
18 chr3:195681000-195682200 Active TSS Brain Germinal Matrix brain
19 chr3:195681000-195682200 Active TSS Fetal Brain Female brain
20 chr3:195681000-195682200 Active TSS Ovary ovary
21 chr3:195681200-195682200 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr3:195681200-195682200 Active TSS Cortex derived primary cultured neurospheres brain
23 chr3:195681200-195682200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
24 chr3:195681200-195682200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr3:195681200-195682200 Active TSS Skeletal Muscle Female skeletal muscle
26 chr3:195681200-195682400 Active TSS H1 Cell Line embryonic stem cell
27 chr3:195681200-195682400 Active TSS HUES64 Cell Line embryonic stem cell
28 chr3:195681200-195682400 Active TSS iPS-20b Cell Line embryonic stem cell
29 chr3:195681200-195682400 Active TSS Breast Myoepithelial Primary Cells Breast
30 chr3:195681200-195682400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
31 chr3:195681200-195682400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
32 chr3:195681200-195682400 Active TSS Colonic Mucosa Colon
33 chr3:195681200-195682400 Active TSS Duodenum Mucosa Duodenum
34 chr3:195681200-195682400 Active TSS Esophagus oesophagus
35 chr3:195681200-195682400 Active TSS Rectal Mucosa Donor 29 rectum
36 chr3:195681200-195682400 Active TSS Rectal Smooth Muscle rectum
37 chr3:195681200-195682400 Active TSS K562 blood
38 chr3:195681200-195682600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr3:195681200-195682600 Active TSS iPS-15b Cell Line embryonic stem cell
40 chr3:195681200-195682600 Active TSS Brain Hippocampus Middle brain
41 chr3:195681400-195682200 Active TSS Primary B cells from peripheral blood blood
42 chr3:195681400-195682200 Active TSS Fetal Adrenal Gland Adrenal Gland
43 chr3:195681600-195682200 Weak transcription Placenta Amnion Placenta Amnion
44 chr3:195681600-195682400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr3:195681600-195682400 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr3:195681600-195682400 Active TSS Fetal Intestine Large intestine
47 chr3:195681600-195682400 Active TSS Fetal Intestine Small intestine
48 chr3:195681600-195682600 Active TSS HUES6 Cell Line embryonic stem cell
49 chr3:195681600-195685600 Weak transcription Gastric stomach
50 chr3:195681600-195691600 Weak transcription Primary T cells from cord blood blood

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