Variant report

Variant rs55761973
Chromosome Location chr21:46781298-46781299
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46770200-46784200 Weak transcription Placenta Amnion Placenta Amnion
2 chr21:46770800-46785400 Weak transcription H9 Cell Line embryonic stem cell
3 chr21:46774000-46783800 Weak transcription Esophagus oesophagus
4 chr21:46774800-46782400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr21:46775200-46787800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr21:46775600-46783200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr21:46776200-46782400 Bivalent Enhancer Fetal Muscle Trunk muscle
8 chr21:46776600-46783000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
9 chr21:46776600-46783200 Weak transcription Lung lung
10 chr21:46776800-46782800 Enhancers K562 blood
11 chr21:46777200-46782400 Enhancers HepG2 liver
12 chr21:46777200-46788600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr21:46777400-46781400 Enhancers H1 Cell Line embryonic stem cell
14 chr21:46777400-46783800 Weak transcription Fetal Thymus thymus
15 chr21:46777800-46781400 Enhancers Fetal Heart heart
16 chr21:46777800-46782800 Weak transcription Pancreas Pancrea
17 chr21:46778000-46782800 Weak transcription HUVEC blood vessel
18 chr21:46778000-46787600 Enhancers Right Ventricle heart
19 chr21:46778200-46783800 Weak transcription Fetal Intestine Large intestine
20 chr21:46778600-46781600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
21 chr21:46778600-46789200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr21:46778800-46783400 Weak transcription Ovary ovary
23 chr21:46778800-46783400 Weak transcription Right Atrium heart
24 chr21:46779000-46781400 Weak transcription ES-WA7 Cell Line embryonic stem cell
25 chr21:46779200-46782400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr21:46779400-46781400 Weak transcription Adipose Nuclei Adipose
27 chr21:46779800-46781400 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr21:46779800-46792600 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr21:46780000-46783400 Weak transcription Left Ventricle heart
30 chr21:46780000-46783600 Weak transcription Brain Substantia Nigra brain
31 chr21:46780400-46781400 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr21:46780400-46783800 Weak transcription Brain Hippocampus Middle brain
33 chr21:46780400-46785400 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr21:46780600-46783400 Weak transcription Brain Cingulate Gyrus brain
35 chr21:46780800-46781800 Bivalent Enhancer Fetal Stomach stomach
36 chr21:46780800-46782200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
37 chr21:46780800-46782600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
38 chr21:46780800-46782800 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr21:46780800-46782800 Enhancers HSMMtube muscle
40 chr21:46780800-46783600 Enhancers A549 lung
41 chr21:46781000-46781600 Enhancers Fetal Intestine Small intestine
42 chr21:46781000-46782200 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
43 chr21:46781000-46782400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
44 chr21:46781000-46782400 Enhancers iPS-18 Cell Line embryonic stem cell
45 chr21:46781000-46782400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
46 chr21:46781000-46782600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
47 chr21:46781000-46789200 Enhancers Fetal Muscle Leg muscle
48 chr21:46781200-46781800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
49 chr21:46781200-46781800 Enhancers Muscle Satellite Cultured Cells --
50 chr21:46781200-46782000 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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