Variant report

Variant rs557637688
Chromosome Location chr11:45943442-45943443
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:45940400-45943600 Weak transcription Lung lung
2 chr11:45940400-45943800 Weak transcription Aorta Aorta
3 chr11:45940600-45943600 Enhancers Cortex derived primary cultured neurospheres brain
4 chr11:45940600-45943600 Enhancers Brain Substantia Nigra brain
5 chr11:45940600-45943600 Enhancers K562 blood
6 chr11:45940600-45943600 Weak transcription NHEK skin
7 chr11:45941000-45943600 Enhancers Primary B cells from peripheral blood blood
8 chr11:45941000-45943600 Weak transcription Right Ventricle heart
9 chr11:45941000-45943800 Weak transcription Right Atrium heart
10 chr11:45941200-45943600 Enhancers Primary T helper 17 cells PMA-I stimulated --
11 chr11:45941200-45944000 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr11:45941200-45953400 Weak transcription Dnd41 blood
13 chr11:45942400-45943600 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
14 chr11:45942600-45943800 Bivalent Enhancer Fetal Intestine Small intestine
15 chr11:45942600-45943800 Bivalent Enhancer Fetal Muscle Trunk muscle
16 chr11:45942800-45943600 Flanking Active TSS HepG2 liver
17 chr11:45942800-45943800 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr11:45942800-45943800 Enhancers Brain Hippocampus Middle brain
19 chr11:45942800-45943800 Bivalent Enhancer Fetal Muscle Leg muscle
20 chr11:45942800-45943800 Bivalent Enhancer Fetal Thymus thymus
21 chr11:45942800-45944000 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
22 chr11:45942800-45944200 Bivalent Enhancer Stomach Mucosa stomach
23 chr11:45943000-45943600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr11:45943000-45943600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
25 chr11:45943000-45943600 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
26 chr11:45943000-45943600 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr11:45943000-45943600 Bivalent Enhancer Fetal Lung lung
28 chr11:45943000-45943600 Bivalent Enhancer Fetal Stomach stomach
29 chr11:45943000-45943600 Enhancers Gastric stomach
30 chr11:45943000-45943600 Enhancers Rectal Mucosa Donor 31 rectum
31 chr11:45943000-45943800 Bivalent Enhancer Brain Anterior Caudate brain
32 chr11:45943000-45943800 Bivalent Enhancer Placenta Placenta
33 chr11:45943200-45943600 Flanking Active TSS H1 Cell Line embryonic stem cell
34 chr11:45943200-45943600 Flanking Bivalent TSS/Enh H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr11:45943200-45943600 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr11:45943200-45943600 Enhancers Esophagus oesophagus
37 chr11:45943200-45943600 Enhancers Ovary ovary
38 chr11:45943200-45943800 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr11:45943200-45943800 Bivalent Enhancer Primary T cells fromperipheralblood blood
40 chr11:45943200-45943800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
41 chr11:45943200-45943800 Bivalent/Poised TSS Brain Germinal Matrix brain
42 chr11:45943200-45943800 Bivalent Enhancer Brain Dorsolateral Prefrontal Cortex brain
43 chr11:45943200-45943800 Weak transcription A549 lung
44 chr11:45943200-45944000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
45 chr11:45943200-45944000 Enhancers Primary T killer naive cells fromperipheralblood blood
46 chr11:45943200-45944000 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
47 chr11:45943200-45944200 Bivalent Enhancer Placenta Amnion Placenta Amnion
48 chr11:45943200-45945200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
49 chr11:45943200-45945400 Active TSS H9 Cell Line embryonic stem cell
50 chr11:45943200-45945800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell

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