Variant report

Variant	rs557690185
Chromosome Location	chr9:73517938-73517939
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893441	chr9:73486034-73594114	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv430072	chr9:73509677-73640530	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv1043383	chr9:73517062-73556679	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:49 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73508600-73519800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr9:73516000-73518000	Enhancers	Fetal Kidney	kidney
3	chr9:73516000-73518200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr9:73516000-73518200	Enhancers	NHLF	lung
5	chr9:73516000-73518400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr9:73516000-73518400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr9:73516600-73518000	Enhancers	Stomach Mucosa	stomach
8	chr9:73516800-73518000	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr9:73516800-73518400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr9:73516800-73518400	Flanking Active TSS	HMEC	breast
11	chr9:73516800-73518600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr9:73517000-73518000	Enhancers	H9 Cell Line	embryonic stem cell
13	chr9:73517000-73518200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr9:73517000-73518400	Enhancers	ES-I3 Cell Line	embryonic stem cell
15	chr9:73517000-73518400	Enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr9:73517200-73518000	Enhancers	H1 Cell Line	embryonic stem cell
17	chr9:73517200-73518200	Enhancers	HUES48 Cell Line	embryonic stem cell
18	chr9:73517200-73518200	Enhancers	HUES64 Cell Line	embryonic stem cell
19	chr9:73517200-73518200	Enhancers	Brain Anterior Caudate	brain
20	chr9:73517200-73518200	Enhancers	Brain Hippocampus Middle	brain
21	chr9:73517200-73518400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr9:73517200-73518400	Enhancers	Breast Myoepithelial Primary Cells	Breast
23	chr9:73517400-73518000	Enhancers	HUES6 Cell Line	embryonic stem cell
24	chr9:73517400-73519400	Weak transcription	Fetal Heart	heart
25	chr9:73517600-73518000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr9:73517600-73518000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr9:73517600-73518000	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr9:73517600-73518000	Enhancers	Duodenum Mucosa	Duodenum
29	chr9:73517600-73518000	Flanking Active TSS	HSMMtube	muscle
30	chr9:73517600-73518200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr9:73517600-73518200	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
32	chr9:73517600-73518400	Enhancers	iPS-18 Cell Line	embryonic stem cell
33	chr9:73517600-73518400	Flanking Active TSS	HUVEC	blood vessel
34	chr9:73517600-73519400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr9:73517800-73518000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
36	chr9:73517800-73518200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr9:73517800-73518200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
38	chr9:73517800-73518200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
39	chr9:73517800-73518200	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
40	chr9:73517800-73518200	Enhancers	Adipose Nuclei	Adipose
41	chr9:73517800-73518200	Flanking Active TSS	HSMM	muscle
42	chr9:73517800-73518200	Flanking Active TSS	NHDF-Ad	bronchial
43	chr9:73517800-73518200	Flanking Active TSS	NHEK	skin
44	chr9:73517800-73518400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
45	chr9:73517800-73518400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
46	chr9:73517800-73518400	Enhancers	Aorta	Aorta
47	chr9:73517800-73518400	Enhancers	Fetal Brain Female	brain
48	chr9:73517800-73518400	Flanking Active TSS	NH-A	brain
49	chr9:73517800-73518400	Flanking Active TSS	Osteobl	bone

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