Variant report

Variant rs557706026
Chromosome Location chr6:32156394-32156395
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32146800-32156600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr6:32147200-32156400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr6:32149800-32156600 Weak transcription Stomach Mucosa stomach
4 chr6:32151000-32156400 Weak transcription Ovary ovary
5 chr6:32152400-32160600 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr6:32153800-32156400 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
7 chr6:32153800-32156400 Genic enhancers Spleen Spleen
8 chr6:32154000-32156600 Genic enhancers Liver Liver
9 chr6:32154200-32156400 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
10 chr6:32154200-32156400 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
11 chr6:32154400-32156400 Genic enhancers Primary B cells from peripheral blood blood
12 chr6:32154600-32156400 Genic enhancers Thymus Thymus
13 chr6:32154600-32156800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
14 chr6:32154800-32156800 Transcr. at gene 5' and 3' Primary neutrophils fromperipheralblood blood
15 chr6:32154800-32157000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
16 chr6:32155000-32156400 Weak transcription Small Intestine intestine
17 chr6:32155200-32157000 Transcr. at gene 5' and 3' Dnd41 blood
18 chr6:32155400-32156400 Weak transcription A549 lung
19 chr6:32155600-32156400 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr6:32155600-32156400 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr6:32155600-32156400 Enhancers Fetal Heart heart
22 chr6:32155600-32156400 Genic enhancers GM12878-XiMat blood
23 chr6:32155600-32156800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
24 chr6:32155600-32157600 Flanking Active TSS Primary hematopoietic stem cells blood
25 chr6:32155800-32156400 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr6:32155800-32156400 Weak transcription H9 Cell Line embryonic stem cell
27 chr6:32155800-32156400 Enhancers Brain Anterior Caudate brain
28 chr6:32155800-32156400 Enhancers Brain Hippocampus Middle brain
29 chr6:32155800-32156400 Enhancers Placenta Amnion Placenta Amnion
30 chr6:32155800-32156400 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr6:32155800-32156600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr6:32155800-32156600 Weak transcription Aorta Aorta
33 chr6:32155800-32156600 Enhancers Pancreas Pancrea
34 chr6:32155800-32156800 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast
35 chr6:32155800-32157000 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr6:32155800-32157200 Flanking Active TSS Stomach Smooth Muscle stomach
37 chr6:32155800-32157400 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
38 chr6:32155800-32157400 Flanking Active TSS HUVEC blood vessel
39 chr6:32155800-32158600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr6:32155800-32158800 Active TSS HSMM muscle
41 chr6:32156000-32156400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr6:32156000-32156400 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr6:32156000-32156400 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
44 chr6:32156000-32156400 Transcr. at gene 5' and 3' Primary T cells effector/memory enriched fromperipheralblood blood
45 chr6:32156000-32156400 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr6:32156000-32156400 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
47 chr6:32156000-32156400 Active TSS Colonic Mucosa Colon
48 chr6:32156000-32156400 Transcr. at gene 5' and 3' Fetal Stomach stomach
49 chr6:32156000-32156600 Enhancers Primary Natural Killer cells fromperipheralblood blood
50 chr6:32156000-32156600 Transcr. at gene 5' and 3' Fetal Intestine Large intestine

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