Variant report

Variant	rs557725549
Chromosome Location	chr10:54882953-54882954
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:20 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467201	chr10:54697623-54929003	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv550906	chr10:54697623-54929003	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv470939	chr10:54700783-54917339	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
4	esv2761596	chr10:54814054-54886345	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
5	nsv825385	chr10:54878972-54950501	Bivalent Enhancer Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv1797317	chr10:54879944-54884225	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS	n/a	n/a	inside rSNPs	n/a
7	esv1825775	chr10:54879944-54884225	ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS	n/a	n/a	inside rSNPs	n/a
8	esv1825481	chr10:54879944-54884328	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a
9	esv1823954	chr10:54879944-54884522	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a
10	esv1795615	chr10:54882943-54884225	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
11	esv1814862	chr10:54882943-54884225	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
12	esv1826440	chr10:54882943-54884225	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
13	esv1846072	chr10:54882943-54884225	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
14	esv1849083	chr10:54882943-54884225	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
15	esv1801835	chr10:54882943-54884522	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
16	esv1850581	chr10:54882943-54884522	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
17	esv1829314	chr10:54882943-54884587	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
18	esv1846887	chr10:54882943-54888532	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
19	esv1819399	chr10:54882943-54889826	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
20	esv1823783	chr10:54882943-54890625	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:54881200-54884000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr10:54881400-54883000	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr10:54882600-54883200	Enhancers	Monocytes-CD14+_RO01746	blood

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