The 2.0 version of rSNPBase

Variant report

Variant rs557730929
Chromosome Location chr1:220417154-220417155
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220379000-220418200 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:220379200-220422600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:220381200-220422000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr1:220384200-220420600 Weak transcription Fetal Kidney kidney
5 chr1:220384200-220423000 Weak transcription Esophagus oesophagus
6 chr1:220384200-220425800 Weak transcription Placenta Amnion Placenta Amnion
7 chr1:220385400-220419400 Weak transcription HUVEC blood vessel
8 chr1:220393000-220441000 Weak transcription NHDF-Ad bronchial
9 chr1:220393800-220425800 Weak transcription Gastric stomach
10 chr1:220394000-220422600 Weak transcription Thymus Thymus
11 chr1:220398400-220420400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:220399000-220418400 Weak transcription H9 Cell Line embryonic stem cell
13 chr1:220400400-220423000 Weak transcription Pancreas Pancrea
14 chr1:220400600-220422200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:220400800-220422200 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr1:220401000-220425200 Weak transcription Right Ventricle heart
17 chr1:220401200-220418200 Weak transcription Spleen Spleen
18 chr1:220401200-220422800 Weak transcription Rectal Smooth Muscle rectum
19 chr1:220401400-220420600 Weak transcription Fetal Intestine Small intestine
20 chr1:220401400-220422600 Weak transcription Fetal Stomach stomach
21 chr1:220401400-220422600 Weak transcription Left Ventricle heart
22 chr1:220401600-220425800 Weak transcription Stomach Smooth Muscle stomach
23 chr1:220402200-220420800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:220403800-220423000 Weak transcription Lung lung
25 chr1:220404000-220425000 Weak transcription NHLF lung
26 chr1:220404600-220420800 Weak transcription NHEK skin
27 chr1:220405400-220420800 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr1:220405800-220420600 Weak transcription HSMM muscle
29 chr1:220405800-220422800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr1:220405800-220423000 Weak transcription Aorta Aorta
31 chr1:220406000-220417200 Weak transcription Primary B cells from peripheral blood blood
32 chr1:220406000-220418400 Weak transcription Fetal Intestine Large intestine
33 chr1:220406000-220422000 Weak transcription Liver Liver
34 chr1:220406000-220422000 Weak transcription HepG2 liver
35 chr1:220406000-220422200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr1:220406000-220422600 Weak transcription Fetal Thymus thymus
37 chr1:220406000-220425200 Weak transcription HSMMtube muscle
38 chr1:220406200-220417200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:220406200-220418000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr1:220406200-220418400 Weak transcription Placenta Placenta
41 chr1:220406200-220420200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr1:220406200-220420400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr1:220406200-220420400 Weak transcription Primary B cells from cord blood blood
44 chr1:220406200-220420400 Weak transcription Primary T cells fromperipheralblood blood
45 chr1:220406200-220420400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr1:220406200-220420600 Weak transcription Fetal Lung lung
47 chr1:220406200-220422000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr1:220406200-220422000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr1:220406200-220423400 Weak transcription Osteobl bone
50 chr1:220406400-220420400 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015