Variant report

Variant	rs557732168
Chromosome Location	chr1:56835474-56835475
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932	chr1:56816732-56842261	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	esv3509488	chr1:56829121-56835877	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
3	esv3344758	chr1:56830514-56836162	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
4	nsv508204	chr1:56830844-56840857	Flanking Active TSS Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases
5	esv3509487	chr1:56831008-56835715	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
6	esv1005520	chr1:56831042-56839645	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56825400-56839000	Weak transcription	Psoas Muscle	Psoas
2	chr1:56835000-56836200	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr1:56835400-56836000	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr1:56835400-56836000	Enhancers	iPS-20b Cell Line	embryonic stem cell
5	chr1:56835400-56836200	Enhancers	HUES64 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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