| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1048608 |
chr11:5328516-5645179 |
Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
60 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1046068 |
chr11:5335943-6063742 |
Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
89 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv832057 |
chr11:5375585-5576200 |
Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
51 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1047754 |
chr11:5489195-5506034 |
Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv896939 |
chr11:5497799-5809548 |
Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
48 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv1039285 |
chr11:5504861-5519672 |
Strong transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv1042308 |
chr11:5504861-5520062 |
Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv971925 |
chr11:5505050-5505658 |
ZNF genes & repeats Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page:
1
