Variant report

Variant rs55778791
Chromosome Location chr12:104915907-104915908
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:104901200-104919200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr12:104901800-104920400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr12:104904400-104916800 Weak transcription A549 lung
4 chr12:104904400-104917600 Weak transcription Stomach Smooth Muscle stomach
5 chr12:104905200-104916200 Genic enhancers Primary hematopoietic stem cells short term culture blood
6 chr12:104905200-104916600 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr12:104905800-104916800 Weak transcription Rectal Smooth Muscle rectum
8 chr12:104906800-104917600 Weak transcription HSMM muscle
9 chr12:104907400-104917000 Weak transcription H9 Cell Line embryonic stem cell
10 chr12:104907600-104917000 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr12:104908600-104920600 Weak transcription Right Ventricle heart
12 chr12:104909400-104919200 Enhancers Primary T helper cells fromperipheralblood blood
13 chr12:104909400-104919400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
14 chr12:104909800-104919400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr12:104910000-104917000 Enhancers Primary T regulatory cells fromperipheralblood blood
16 chr12:104910400-104918200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
17 chr12:104911000-104921800 Enhancers Primary Natural Killer cells fromperipheralblood blood
18 chr12:104911400-104918600 Enhancers Primary T helper cells PMA-I stimulated --
19 chr12:104911800-104916200 Enhancers Cortex derived primary cultured neurospheres brain
20 chr12:104912000-104919200 Enhancers Primary B cells from peripheral blood blood
21 chr12:104912400-104918400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr12:104912800-104919200 Enhancers Primary monocytes fromperipheralblood blood
23 chr12:104913200-104917800 Enhancers Right Atrium heart
24 chr12:104913200-104918600 Enhancers Placenta Placenta
25 chr12:104913400-104918600 Enhancers Spleen Spleen
26 chr12:104913600-104919600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr12:104913800-104916800 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr12:104913800-104916800 Weak transcription Brain Angular Gyrus brain
29 chr12:104913800-104917200 Weak transcription Brain Hippocampus Middle brain
30 chr12:104914000-104916200 Weak transcription Fetal Thymus thymus
31 chr12:104914000-104916800 Weak transcription Colon Smooth Muscle Colon
32 chr12:104914000-104917000 Weak transcription Ovary ovary
33 chr12:104914000-104917200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr12:104914000-104917200 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr12:104914000-104918600 Enhancers Primary hematopoietic stem cells blood
36 chr12:104914000-104921200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr12:104914200-104916400 Weak transcription Primary T cells from cord blood blood
38 chr12:104914200-104917000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr12:104914200-104917000 Weak transcription Duodenum Mucosa Duodenum
40 chr12:104914400-104917000 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr12:104914400-104917000 Weak transcription HSMMtube muscle
42 chr12:104914400-104918200 Enhancers NHDF-Ad bronchial
43 chr12:104914400-104919400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr12:104914600-104916400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr12:104914600-104916600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr12:104914600-104916600 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr12:104914600-104916600 Weak transcription K562 blood
48 chr12:104914600-104917000 Weak transcription H1 Cell Line embryonic stem cell
49 chr12:104914600-104917000 Weak transcription Fetal Muscle Leg muscle
50 chr12:104914600-104917200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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