Variant report

Variant	rs557791448
Chromosome Location	chr14:31769359-31769360
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:31720575..31722092-chr14:31768141..31769654,2	MCF-7	breast:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2830427	chr14:31639110-32000034	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv1050597	chr14:31711248-31904761	Strong transcription Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
3	nsv901589	chr14:31768231-31944723	Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:111 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:31749400-31789000	Weak transcription	Psoas Muscle	Psoas
2	chr14:31753200-31769400	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr14:31753200-31776600	Weak transcription	Aorta	Aorta
4	chr14:31753400-31769400	Weak transcription	Brain Anterior Caudate	brain
5	chr14:31753400-31769400	Weak transcription	Stomach Smooth Muscle	stomach
6	chr14:31753400-31774000	Weak transcription	NHDF-Ad	bronchial
7	chr14:31753600-31772600	Weak transcription	Primary hematopoietic stem cells	blood
8	chr14:31755200-31769400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr14:31756200-31769800	Weak transcription	Liver	Liver
10	chr14:31756400-31769600	Weak transcription	Lung	lung
11	chr14:31757200-31769400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr14:31757800-31769400	Weak transcription	Fetal Muscle Leg	muscle
13	chr14:31758000-31775600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr14:31759600-31769400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
15	chr14:31759800-31769400	Weak transcription	Fetal Brain Male	brain
16	chr14:31760600-31779400	Weak transcription	Pancreas	Pancrea
17	chr14:31760800-31771400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
18	chr14:31760800-31772800	Weak transcription	Primary B cells from peripheral blood	blood
19	chr14:31760800-31773200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr14:31760800-31774000	Weak transcription	Primary B cells from cord blood	blood
21	chr14:31760800-31776400	Weak transcription	Stomach Mucosa	stomach
22	chr14:31760800-31781000	Weak transcription	Fetal Kidney	kidney
23	chr14:31761000-31770600	Weak transcription	A549	lung
24	chr14:31761200-31771200	Weak transcription	Fetal Intestine Large	intestine
25	chr14:31761400-31769600	Weak transcription	Primary T cells fromperipheralblood	blood
26	chr14:31761400-31769600	Weak transcription	Primary T helper cells fromperipheralblood	blood
27	chr14:31761400-31771200	Weak transcription	Primary T helper cells PMA-I stimulated	--
28	chr14:31761600-31769400	Weak transcription	Sigmoid Colon	Sigmoid Colon
29	chr14:31761600-31770600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
30	chr14:31761600-31794400	Strong transcription	Primary neutrophils fromperipheralblood	blood
31	chr14:31761600-31794400	Strong transcription	Monocytes-CD14+_RO01746	blood
32	chr14:31762200-31780600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr14:31762200-31785200	Weak transcription	HMEC	breast
34	chr14:31762400-31794800	Strong transcription	Primary monocytes fromperipheralblood	blood
35	chr14:31762600-31779800	Weak transcription	Esophagus	oesophagus
36	chr14:31762800-31769400	Weak transcription	Fetal Lung	lung
37	chr14:31762800-31771000	Weak transcription	Right Ventricle	heart
38	chr14:31762800-31783000	Weak transcription	Fetal Thymus	thymus
39	chr14:31762800-31811800	Weak transcription	Fetal Heart	heart
40	chr14:31763000-31769400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
41	chr14:31763200-31771200	Weak transcription	Skeletal Muscle Male	skeletal muscle
42	chr14:31763200-31783400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
43	chr14:31763400-31780600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
44	chr14:31763400-31781800	Weak transcription	HUES48 Cell Line	embryonic stem cell
45	chr14:31763400-31784600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
46	chr14:31763600-31774000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
47	chr14:31763600-31784600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
48	chr14:31764400-31775000	Weak transcription	HUES64 Cell Line	embryonic stem cell
49	chr14:31764600-31771400	Weak transcription	NH-A	brain
50	chr14:31764800-31769400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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