Variant report

Variant	rs557827011
Chromosome Location	chr6:128990182-128990183
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1020071	chr6:128579774-129048919	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	nsv538441	chr6:128579774-129048919	Flanking Active TSS Weak transcription Strong transcription Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
3	nsv830801	chr6:128878436-129064667	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	esv2630065	chr6:128989165-128990843	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
5	esv2183109	chr6:128989632-128990360	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
6	esv3473328	chr6:128989698-128990249	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
7	esv9089	chr6:128989710-128990403	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
8	esv3516640	chr6:128989729-128990250	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv3516636	chr6:128989730-128990257	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
10	esv3516637	chr6:128989745-128990187	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
11	esv3473327	chr6:128989750-128990241	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
12	esv3473325	chr6:128989759-128990213	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
13	esv4212	chr6:128989770-128990198	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
14	esv3516642	chr6:128989770-128990212	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
15	esv3516638	chr6:128989774-128990194	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
16	esv3329905	chr6:128989790-128990182	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:128988800-128993400	Weak transcription	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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