Variant report

Variant	rs55785102
Chromosome Location	chr8:119618032-119618033
allele	lengthTooLong
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891413	chr8:119607281-119679668	Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv1928288	chr8:119617828-119618252	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv1003557	chr8:119618004-119618041	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv1350035	chr8:119618031-119618071	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119600600-119622600	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr8:119605800-119631800	Weak transcription	Fetal Intestine Small	intestine
3	chr8:119609200-119633000	Weak transcription	Gastric	stomach
4	chr8:119609400-119633600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr8:119610000-119622000	Weak transcription	Lung	lung
6	chr8:119610400-119626600	Weak transcription	Brain Anterior Caudate	brain
7	chr8:119611400-119618800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr8:119614400-119618600	Weak transcription	Brain Cingulate Gyrus	brain
9	chr8:119614400-119621400	Weak transcription	Brain Substantia Nigra	brain
10	chr8:119614600-119618800	Weak transcription	Brain Hippocampus Middle	brain
11	chr8:119614600-119619000	Weak transcription	Brain Angular Gyrus	brain
12	chr8:119614600-119626600	Weak transcription	Brain Inferior Temporal Lobe	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links