Variant report

Variant	rs557863054
Chromosome Location	chr14:32304591-32304592
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:32303855..32305860-chr14:32313557..32315760,2	MCF-7	breast:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv564180	chr14:31958566-32368934	Strong transcription Enhancers Transcr. at gene 5' and 3' Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv564181	chr14:31958761-32363980	Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Active TSS Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
3	nsv564182	chr14:32110519-32584337	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
4	nsv1046526	chr14:32110537-32567426	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
5	nsv901593	chr14:32282564-32350371	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases
6	esv3390955	chr14:32304445-32304696	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32250600-32322400	Weak transcription	Primary T helper cells fromperipheralblood	blood
2	chr14:32281800-32330200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
3	chr14:32291000-32310400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr14:32294200-32328800	Weak transcription	Ovary	ovary
5	chr14:32294800-32328000	Weak transcription	Left Ventricle	heart
6	chr14:32295000-32332800	Weak transcription	Primary hematopoietic stem cells	blood
7	chr14:32297000-32306600	Weak transcription	Primary B cells from peripheral blood	blood
8	chr14:32297400-32325800	Weak transcription	Primary B cells from cord blood	blood
9	chr14:32298200-32322000	Weak transcription	Primary T cells from cord blood	blood
10	chr14:32299000-32325800	Weak transcription	Fetal Stomach	stomach
11	chr14:32303600-32304600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
12	chr14:32303800-32304600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr14:32303800-32304600	Enhancers	Fetal Heart	heart
14	chr14:32303800-32304600	Enhancers	HUVEC	blood vessel
15	chr14:32303800-32304800	Enhancers	Muscle Satellite Cultured Cells	--
16	chr14:32303800-32304800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr14:32303800-32305000	Enhancers	Hela-S3	cervix
18	chr14:32304000-32304600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr14:32304000-32304600	Enhancers	HMEC	breast
20	chr14:32304000-32304800	Enhancers	NHDF-Ad	bronchial
21	chr14:32304200-32319600	Weak transcription	HepG2	liver
22	chr14:32304400-32304800	Enhancers	Pancreatic Islets	Pancreatic Islet
23	chr14:32304400-32312200	Weak transcription	Esophagus	oesophagus

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