Variant report

Variant rs557879371
Chromosome Location chr22:23727419-23727420
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:23708800-23728200 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr22:23723800-23728600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
3 chr22:23725000-23728600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr22:23725200-23728600 Enhancers Fetal Muscle Leg muscle
5 chr22:23725200-23728800 Bivalent Enhancer Fetal Muscle Trunk muscle
6 chr22:23725400-23736800 Weak transcription Fetal Brain Female brain
7 chr22:23725600-23727600 Enhancers Primary hematopoietic stem cells blood
8 chr22:23725600-23728000 Enhancers Primary hematopoietic stem cells short term culture blood
9 chr22:23725600-23728600 Enhancers Brain Cingulate Gyrus brain
10 chr22:23725800-23727600 Enhancers Brain Hippocampus Middle brain
11 chr22:23725800-23727800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr22:23726200-23728000 Enhancers Fetal Stomach stomach
13 chr22:23726200-23728600 Enhancers Ovary ovary
14 chr22:23726200-23729800 Weak transcription Spleen Spleen
15 chr22:23726400-23734600 Weak transcription Placenta Amnion Placenta Amnion
16 chr22:23726600-23727600 Enhancers Placenta Placenta
17 chr22:23726600-23727800 Weak transcription A549 lung
18 chr22:23726600-23728400 Weak transcription Fetal Thymus thymus
19 chr22:23726600-23730000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr22:23726600-23731400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr22:23726800-23728000 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
22 chr22:23726800-23728200 Weak transcription Fetal Brain Male brain
23 chr22:23726800-23728600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr22:23726800-23731400 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr22:23726800-23733200 Weak transcription Lung lung
26 chr22:23726800-23739400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr22:23726800-23744200 Weak transcription Brain Anterior Caudate brain
28 chr22:23727000-23727600 Weak transcription Brain Substantia Nigra brain
29 chr22:23727000-23728000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr22:23727000-23728000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr22:23727000-23728200 Weak transcription Brain Angular Gyrus brain
32 chr22:23727400-23728200 Enhancers Fetal Adrenal Gland Adrenal Gland
33 chr22:23727400-23728600 Enhancers Brain Inferior Temporal Lobe brain
34 chr22:23727400-23729200 Weak transcription Brain Germinal Matrix brain
35 chr22:23727400-23731200 Weak transcription Fetal Intestine Small intestine

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