The 2.0 version of rSNPBase

Variant report

Variant rs55789802
Chromosome Location chr11:76061841-76061842
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:76048000-76064800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr11:76048200-76064000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr11:76050000-76064600 Weak transcription Rectal Smooth Muscle rectum
4 chr11:76050400-76064000 Weak transcription Fetal Stomach stomach
5 chr11:76050400-76064200 Weak transcription Left Ventricle heart
6 chr11:76050400-76064200 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr11:76050400-76064200 Weak transcription Thymus Thymus
8 chr11:76050400-76064200 Weak transcription NHLF lung
9 chr11:76050400-76065000 Weak transcription Colonic Mucosa Colon
10 chr11:76050600-76064200 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr11:76050600-76064600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr11:76050800-76063800 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr11:76050800-76063800 Weak transcription Osteobl bone
14 chr11:76050800-76064200 Weak transcription Primary hematopoietic stem cells blood
15 chr11:76051000-76063800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr11:76051000-76064200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr11:76051000-76064400 Weak transcription Aorta Aorta
18 chr11:76051200-76065000 Weak transcription Gastric stomach
19 chr11:76051200-76065200 Weak transcription Right Ventricle heart
20 chr11:76051200-76066200 Weak transcription NHDF-Ad bronchial
21 chr11:76051400-76063800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr11:76052600-76065200 Weak transcription HSMM muscle
23 chr11:76052800-76063800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr11:76053200-76064200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr11:76054000-76063800 Weak transcription Hela-S3 cervix
26 chr11:76054200-76064200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr11:76054600-76065600 Weak transcription Fetal Kidney kidney
28 chr11:76054600-76080600 Weak transcription Psoas Muscle Psoas
29 chr11:76055200-76064600 Weak transcription Fetal Brain Female brain
30 chr11:76055400-76063800 Weak transcription A549 lung
31 chr11:76055400-76064200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr11:76055400-76064400 Weak transcription Fetal Intestine Small intestine
33 chr11:76055400-76065200 Weak transcription HepG2 liver
34 chr11:76056800-76065000 Weak transcription Esophagus oesophagus
35 chr11:76056800-76080600 Weak transcription Small Intestine intestine
36 chr11:76057000-76063800 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr11:76057200-76063800 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr11:76057400-76065000 Weak transcription Lung lung
39 chr11:76057800-76064000 Weak transcription NHEK skin
40 chr11:76058200-76064000 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr11:76058200-76064800 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr11:76058400-76064600 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr11:76058600-76064000 Weak transcription Fetal Intestine Large intestine
44 chr11:76058600-76065800 Weak transcription Brain Germinal Matrix brain
45 chr11:76058800-76064400 Weak transcription HUVEC blood vessel
46 chr11:76058800-76071400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr11:76059000-76063600 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr11:76059000-76063600 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr11:76059000-76064000 Weak transcription Brain Hippocampus Middle brain
50 chr11:76059000-76064000 Weak transcription K562 blood

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Last update: Aug 31, 2015