Variant report

Variant rs55797905
Chromosome Location chr10:4259615-4259616
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:4251600-4259800 Weak transcription Aorta Aorta
2 chr10:4255000-4263200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr10:4256000-4263400 Weak transcription HSMM muscle
4 chr10:4256800-4259800 Enhancers HUES64 Cell Line embryonic stem cell
5 chr10:4257000-4259800 Enhancers iPS-18 Cell Line embryonic stem cell
6 chr10:4257000-4259800 Enhancers Duodenum Mucosa Duodenum
7 chr10:4257000-4260400 Enhancers Fetal Heart heart
8 chr10:4257200-4260400 Enhancers Small Intestine intestine
9 chr10:4257400-4259800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr10:4257400-4260000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
11 chr10:4257400-4282400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr10:4257600-4259800 Enhancers iPS-20b Cell Line embryonic stem cell
13 chr10:4257800-4259800 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr10:4258000-4260800 Weak transcription HSMMtube muscle
15 chr10:4258400-4263200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr10:4258600-4259800 Weak transcription H1 Cell Line embryonic stem cell
17 chr10:4258600-4259800 Weak transcription Right Ventricle heart
18 chr10:4259200-4260000 Enhancers HUVEC blood vessel
19 chr10:4259200-4260200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
20 chr10:4259200-4260200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr10:4259400-4259800 Enhancers Stomach Smooth Muscle stomach
22 chr10:4259400-4260000 Enhancers Duodenum Smooth Muscle Duodenum
23 chr10:4259400-4260000 Enhancers Fetal Intestine Small intestine
24 chr10:4259400-4262000 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr10:4259600-4259800 Active TSS Rectal Mucosa Donor 29 rectum
26 chr10:4259600-4260000 Active TSS Colon Smooth Muscle Colon
27 chr10:4259600-4260200 Active TSS Brain Anterior Caudate brain
28 chr10:4259600-4260200 Enhancers Fetal Intestine Large intestine
29 chr10:4259600-4260200 Enhancers Left Ventricle heart
30 chr10:4259600-4260200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
31 chr10:4259600-4260400 Active TSS Colonic Mucosa Colon

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