Variant report

Variant rs55798204
Chromosome Location chr2:111917705-111917706
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:111881800-111919800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr2:111884800-111925400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr2:111893600-111918600 Weak transcription Colon Smooth Muscle Colon
4 chr2:111898800-111920600 Weak transcription Fetal Kidney kidney
5 chr2:111904400-111920800 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr2:111906400-111919600 Strong transcription HUES48 Cell Line embryonic stem cell
7 chr2:111906600-111927000 Weak transcription Rectal Smooth Muscle rectum
8 chr2:111906800-111918200 Strong transcription Rectal Mucosa Donor 31 rectum
9 chr2:111907400-111920000 Strong transcription Monocytes-CD14+_RO01746 blood
10 chr2:111907400-111920200 Strong transcription HUES6 Cell Line embryonic stem cell
11 chr2:111907600-111919200 Strong transcription Fetal Intestine Small intestine
12 chr2:111907600-111919200 Strong transcription Fetal Stomach stomach
13 chr2:111907600-111919800 Strong transcription Primary monocytes fromperipheralblood blood
14 chr2:111908000-111920000 Strong transcription Fetal Intestine Large intestine
15 chr2:111909200-111919200 Strong transcription Fetal Adrenal Gland Adrenal Gland
16 chr2:111909600-111918600 Weak transcription Fetal Brain Male brain
17 chr2:111909600-111922600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr2:111910000-111925200 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr2:111910200-111922800 Weak transcription Aorta Aorta
20 chr2:111910400-111919600 Weak transcription Small Intestine intestine
21 chr2:111910400-111922400 Weak transcription Ovary ovary
22 chr2:111910600-111918000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr2:111911400-111919000 Weak transcription K562 blood
24 chr2:111911600-111918600 Weak transcription Colonic Mucosa Colon
25 chr2:111912400-111919800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr2:111912800-111919600 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr2:111913600-111919000 Weak transcription Stomach Mucosa stomach
28 chr2:111913800-111918600 Weak transcription Brain Angular Gyrus brain
29 chr2:111914200-111918600 Weak transcription Brain Substantia Nigra brain
30 chr2:111914200-111918600 Strong transcription Sigmoid Colon Sigmoid Colon
31 chr2:111914200-111918800 Weak transcription Brain Hippocampus Middle brain
32 chr2:111914200-111919000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr2:111914400-111920600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr2:111914600-111919600 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr2:111914600-111921400 Genic enhancers Breast Myoepithelial Primary Cells Breast
36 chr2:111914600-111921400 Genic enhancers Liver Liver
37 chr2:111915000-111917800 Enhancers Primary T cells fromperipheralblood blood
38 chr2:111915200-111925600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
39 chr2:111915400-111917800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr2:111915400-111920000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr2:111915400-111920000 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr2:111915600-111918000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr2:111915600-111918600 Weak transcription Brain Anterior Caudate brain
44 chr2:111915600-111919000 Weak transcription Brain Inferior Temporal Lobe brain
45 chr2:111915600-111919400 Strong transcription iPS-18 Cell Line embryonic stem cell
46 chr2:111915600-111919400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr2:111915600-111920200 Weak transcription ES-WA7 Cell Line embryonic stem cell
48 chr2:111915600-111925400 Strong transcription Dnd41 blood
49 chr2:111915800-111917800 Weak transcription Fetal Brain Female brain
50 chr2:111915800-111918600 Weak transcription Pancreatic Islets Pancreatic Islet

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