Variant report

Variant	rs557986817
Chromosome Location	chr21:16881161-16881162
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1063385	chr21:16521617-16926212	Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv1064280	chr21:16664312-17049272	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv834049	chr21:16717421-16905300	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv1064621	chr21:16881027-16937290	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16880200-16881400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
2	chr21:16880400-16881800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
3	chr21:16880400-16881800	Enhancers	Primary T killer memory cells from peripheral blood	blood
4	chr21:16880400-16882200	Enhancers	Dnd41	blood
5	chr21:16880600-16881800	Enhancers	Primary T helper naive cells from peripheral blood	blood
6	chr21:16880600-16882200	Enhancers	HepG2	liver
7	chr21:16880800-16881400	Enhancers	Primary B cells from peripheral blood	blood
8	chr21:16880800-16881400	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
9	chr21:16880800-16881600	Enhancers	Primary T cells from cord blood	blood
10	chr21:16880800-16881600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr21:16880800-16881800	Enhancers	Primary T helper cells PMA-I stimulated	--
12	chr21:16881000-16881400	Enhancers	Thymus	Thymus
13	chr21:16881000-16881800	Enhancers	Primary T helper cells fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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