Variant report

Variant	rs558023609
Chromosome Location	chr13:79820281-79820282
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916612	chr13:79669876-79820692	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv523536	chr13:79820126-79824974	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:79817600-79824400	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr13:79819800-79820600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr13:79819800-79821000	Enhancers	GM12878-XiMat	blood
4	chr13:79820000-79821000	Enhancers	Primary B cells from peripheral blood	blood
5	chr13:79820200-79820600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr13:79820200-79820800	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr13:79820200-79820800	Enhancers	HUES6 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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