Variant report

Variant rs55812163
Chromosome Location chr21:47553174-47553175
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47530800-47563600 Weak transcription Right Atrium heart
2 chr21:47535000-47554800 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr21:47538200-47563600 Weak transcription Brain Anterior Caudate brain
4 chr21:47543600-47553800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr21:47544000-47553400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
6 chr21:47544200-47553800 Strong transcription Osteobl bone
7 chr21:47545000-47556200 Weak transcription HSMMtube muscle
8 chr21:47546200-47556200 Weak transcription Fetal Lung lung
9 chr21:47547600-47558400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr21:47547800-47555000 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr21:47548000-47557200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr21:47548000-47563600 Weak transcription Gastric stomach
13 chr21:47548200-47555000 Weak transcription H9 Cell Line embryonic stem cell
14 chr21:47548200-47557600 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr21:47548800-47553400 Strong transcription Fetal Stomach stomach
16 chr21:47549200-47556800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr21:47549400-47557000 Weak transcription H1 Cell Line embryonic stem cell
18 chr21:47549400-47557800 Weak transcription Aorta Aorta
19 chr21:47549600-47553800 Weak transcription Adipose Nuclei Adipose
20 chr21:47549600-47555200 Weak transcription Left Ventricle heart
21 chr21:47549800-47563600 Weak transcription Brain Inferior Temporal Lobe brain
22 chr21:47550000-47556400 Weak transcription Right Ventricle heart
23 chr21:47550200-47553600 Weak transcription Muscle Satellite Cultured Cells --
24 chr21:47550600-47554000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr21:47550800-47556000 Weak transcription Fetal Heart heart
26 chr21:47551000-47563600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr21:47551200-47554800 Weak transcription Fetal Muscle Trunk muscle
28 chr21:47551200-47557000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr21:47551200-47564000 Weak transcription Spleen Spleen
30 chr21:47551400-47554200 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
31 chr21:47552000-47553200 Strong transcription Stomach Smooth Muscle stomach
32 chr21:47552000-47553400 Strong transcription Ovary ovary
33 chr21:47552400-47556000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr21:47552400-47556000 Weak transcription Liver Liver
35 chr21:47552400-47556400 Weak transcription NHDF-Ad bronchial
36 chr21:47552400-47557600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr21:47552400-47563400 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr21:47552600-47554800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr21:47552800-47553400 Strong transcription Fetal Intestine Small intestine
40 chr21:47552800-47554000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr21:47553000-47553200 Active TSS Colonic Mucosa Colon
42 chr21:47553000-47553200 Enhancers Fetal Muscle Leg muscle

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