Variant report

Variant	rs55814113
Chromosome Location	chr10:44185885-44185886
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:17)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:17 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:44185445..44186170-chr10:45360180..45360895,2	MCF-7	breast:
2	chr10:44185633..44186177-chr10:44834778..44835408,2	MCF-7	breast:
3	chr10:44185584..44187183-chr10:44191790..44193996,2	K562	blood:
4	chr10:44173211..44175756-chr10:44184314..44186963,2	K562	blood:
5	chr10:44184901..44186647-chr10:44880289..44882239,2	MCF-7	breast:
6	chr10:44185602..44188536-chr10:44195679..44198454,2	MCF-7	breast:
7	chr10:44183379..44187369-chr10:44190252..44193395,4	MCF-7	breast:
8	chr10:44185266..44187745-chr10:44193521..44195078,2	MCF-7	breast:
9	chr10:44185606..44186138-chr10:44280595..44281252,3	MCF-7	breast:
10	chr10:44185406..44187428-chr10:44683706..44685652,2	MCF-7	breast:
11	chr10:44185358..44185925-chr10:44525349..44526293,3	MCF-7	breast:
12	chr10:44185239..44186144-chr10:44525122..44526258,6	MCF-7	breast:
13	chr10:44185254..44186130-chr10:45360020..45360770,2	K562	blood:
14	chr10:44185118..44187930-chr10:44667702..44670061,3	MCF-7	breast:
15	chr10:44185215..44186124-chr10:44881924..44882633,3	MCF-7	breast:
16	chr10:44185207..44186112-chr10:44349223..44350193,2	MCF-7	breast:
17	chr10:44173211..44175882-chr10:44184314..44186858,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000107562	Chromatin interaction

rs_ID	r²[population]
rs55673741	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58650126	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74140033	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74140036	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74140038	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74140040	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44184200-44186200	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
2	chr10:44184600-44186200	Enhancers	Spleen	Spleen
3	chr10:44184600-44186600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
4	chr10:44184800-44186000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
5	chr10:44184800-44186000	Active TSS	Primary T killer memory cells from peripheral blood	blood
6	chr10:44184800-44186000	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
7	chr10:44184800-44186200	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
8	chr10:44184800-44186200	Flanking Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr10:44184800-44186200	Active TSS	Primary T helper naive cells fromperipheralblood	blood
10	chr10:44184800-44186200	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr10:44184800-44186200	Active TSS	Brain Anterior Caudate	brain
12	chr10:44184800-44186200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
13	chr10:44184800-44186200	Active TSS	Brain Substantia Nigra	brain
14	chr10:44184800-44186200	Flanking Active TSS	Colonic Mucosa	Colon
15	chr10:44184800-44186200	Active TSS	Colon Smooth Muscle	Colon
16	chr10:44184800-44186200	Flanking Active TSS	Fetal Muscle Leg	muscle
17	chr10:44184800-44186200	Active TSS	Rectal Mucosa Donor 29	rectum
18	chr10:44184800-44186400	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
19	chr10:44184800-44186400	Flanking Active TSS	Adipose Nuclei	Adipose
20	chr10:44184800-44186800	Active TSS	Placenta Amnion	Placenta Amnion
21	chr10:44185000-44186000	Active TSS	Primary T helper naive cells from peripheral blood	blood
22	chr10:44185000-44186000	Active TSS	HSMMtube	muscle
23	chr10:44185000-44186200	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
24	chr10:44185000-44186200	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
25	chr10:44185000-44186200	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
26	chr10:44185000-44186200	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
27	chr10:44185000-44186200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
28	chr10:44185000-44186200	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr10:44185000-44186200	Active TSS	Brain Angular Gyrus	brain
30	chr10:44185000-44186200	Active TSS	Brain Cingulate Gyrus	brain
31	chr10:44185000-44186200	Active TSS	Brain Inferior Temporal Lobe	brain
32	chr10:44185000-44186200	Active TSS	Fetal Heart	heart
33	chr10:44185000-44186200	Active TSS	Fetal Kidney	kidney
34	chr10:44185000-44186200	Active TSS	Pancreatic Islets	Pancreatic Islet
35	chr10:44185000-44186200	Active TSS	Gastric	stomach
36	chr10:44185000-44186200	Active TSS	Rectal Smooth Muscle	rectum
37	chr10:44185000-44186200	Active TSS	Right Atrium	heart
38	chr10:44185000-44186200	Active TSS	HSMM	muscle
39	chr10:44185000-44186200	Flanking Active TSS	HUVEC	blood vessel
40	chr10:44185000-44186400	Active TSS	Breast Myoepithelial Primary Cells	Breast
41	chr10:44185000-44186400	Active TSS	Primary T cells from cord blood	blood
42	chr10:44185000-44186400	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
43	chr10:44185000-44187200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
44	chr10:44185200-44186000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
45	chr10:44185200-44186000	Active TSS	Fetal Stomach	stomach
46	chr10:44185200-44186000	Active TSS	Pancreas	Pancrea
47	chr10:44185200-44186000	Active TSS	K562	blood
48	chr10:44185200-44186000	Active TSS	NHLF	lung
49	chr10:44185200-44186200	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
50	chr10:44185200-44186200	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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