Variant report

Variant rs558258
Chromosome Location chr22:20917528-20917529
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20890800-20923000 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr22:20905000-20923000 Strong transcription Primary monocytes fromperipheralblood blood
3 chr22:20905800-20917800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr22:20907400-20918000 Strong transcription Liver Liver
5 chr22:20907400-20921200 Weak transcription Small Intestine intestine
6 chr22:20908400-20922800 Strong transcription Fetal Intestine Large intestine
7 chr22:20909000-20921000 Strong transcription Rectal Mucosa Donor 29 rectum
8 chr22:20911800-20918800 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr22:20911800-20919400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr22:20911800-20919400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
11 chr22:20911800-20920600 Genic enhancers Primary T cells fromperipheralblood blood
12 chr22:20911800-20931000 Strong transcription Primary neutrophils fromperipheralblood blood
13 chr22:20912000-20918200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr22:20912000-20918600 Strong transcription NHDF-Ad bronchial
15 chr22:20912000-20920600 Strong transcription Osteobl bone
16 chr22:20912000-20920800 Strong transcription Duodenum Mucosa Duodenum
17 chr22:20912200-20920200 Strong transcription HSMM muscle
18 chr22:20912800-20918600 Strong transcription Placenta Amnion Placenta Amnion
19 chr22:20913200-20918800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr22:20913200-20919000 Weak transcription Brain Angular Gyrus brain
21 chr22:20913200-20919600 Strong transcription Fetal Adrenal Gland Adrenal Gland
22 chr22:20913200-20920800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr22:20913400-20918600 Weak transcription Spleen Spleen
24 chr22:20913400-20918800 Weak transcription Aorta Aorta
25 chr22:20913400-20918800 Weak transcription Colonic Mucosa Colon
26 chr22:20913400-20918800 Strong transcription Fetal Thymus thymus
27 chr22:20913400-20919600 Weak transcription H9 Cell Line embryonic stem cell
28 chr22:20913400-20920800 Weak transcription Right Atrium heart
29 chr22:20913800-20922600 Weak transcription Fetal Brain Male brain
30 chr22:20913800-20942000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr22:20914000-20917600 Weak transcription Fetal Brain Female brain
32 chr22:20914000-20917800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr22:20914000-20917800 Strong transcription K562 blood
34 chr22:20914000-20918400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr22:20914000-20918600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr22:20914000-20918800 Weak transcription Brain Inferior Temporal Lobe brain
37 chr22:20914000-20918800 Weak transcription Rectal Smooth Muscle rectum
38 chr22:20914000-20919400 Weak transcription Fetal Lung lung
39 chr22:20914000-20920000 Strong transcription Thymus Thymus
40 chr22:20914000-20920600 Strong transcription Breast Myoepithelial Primary Cells Breast
41 chr22:20914000-20920600 Strong transcription Fetal Stomach stomach
42 chr22:20914000-20920800 Strong transcription Fetal Muscle Trunk muscle
43 chr22:20914000-20920800 Weak transcription Stomach Mucosa stomach
44 chr22:20914000-20921000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr22:20914000-20921000 Weak transcription Fetal Heart heart
46 chr22:20914000-20921800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr22:20914000-20922200 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr22:20914000-20922400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr22:20914000-20923000 Strong transcription Primary hematopoietic stem cells short term culture blood
50 chr22:20914000-20923400 Strong transcription Fetal Intestine Small intestine

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