Variant report

Variant rs558265343
Chromosome Location chr5:176924162-176924163
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:176917800-176924200 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr5:176921600-176924200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr5:176922200-176925400 Active TSS Aorta Aorta
4 chr5:176922600-176924400 Flanking Active TSS Adipose Nuclei Adipose
5 chr5:176922800-176924200 Enhancers Primary T helper cells PMA-I stimulated --
6 chr5:176922800-176924200 Enhancers Primary T killer naive cells fromperipheralblood blood
7 chr5:176923000-176924400 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
8 chr5:176923000-176924600 Flanking Active TSS Colonic Mucosa Colon
9 chr5:176923000-176924800 Active TSS Brain Hippocampus Middle brain
10 chr5:176923000-176925000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr5:176923000-176925200 Active TSS Brain Angular Gyrus brain
12 chr5:176923000-176925200 Active TSS Left Ventricle heart
13 chr5:176923000-176925600 Active TSS Brain Anterior Caudate brain
14 chr5:176923200-176925000 Active TSS Gastric stomach
15 chr5:176923200-176925000 Active TSS A549 lung
16 chr5:176923200-176925000 Active TSS NHDF-Ad bronchial
17 chr5:176923200-176925200 Active TSS ES-I3 Cell Line embryonic stem cell
18 chr5:176923200-176925200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr5:176923200-176925600 Active TSS ES-WA7 Cell Line embryonic stem cell
20 chr5:176923200-176925600 Active TSS H9 Cell Line embryonic stem cell
21 chr5:176923200-176925600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
22 chr5:176923200-176925600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr5:176923400-176924200 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr5:176923400-176924200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr5:176923400-176924400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr5:176923400-176924800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr5:176923400-176924800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
28 chr5:176923400-176925000 Active TSS HUES64 Cell Line embryonic stem cell
29 chr5:176923400-176925000 Active TSS NH-A brain
30 chr5:176923400-176925200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr5:176923400-176925200 Active TSS iPS-15b Cell Line embryonic stem cell
32 chr5:176923400-176925200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr5:176923400-176925200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr5:176923400-176925200 Active TSS Rectal Smooth Muscle rectum
35 chr5:176923400-176925400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
36 chr5:176923400-176925400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr5:176923400-176925400 Flanking Active TSS Dnd41 blood
38 chr5:176923400-176925600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr5:176923400-176925600 Active TSS Fetal Kidney kidney
40 chr5:176923600-176924200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
41 chr5:176923600-176924200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
42 chr5:176923600-176924400 Flanking Active TSS Placenta Placenta
43 chr5:176923600-176924600 Transcr. at gene 5' and 3' Right Atrium heart
44 chr5:176923600-176924800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
45 chr5:176923600-176924800 Active TSS Brain Substantia Nigra brain
46 chr5:176923600-176924800 Active TSS Fetal Lung lung
47 chr5:176923600-176924800 Active TSS Right Ventricle heart
48 chr5:176923600-176924800 Active TSS Thymus Thymus
49 chr5:176923600-176925000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr5:176923600-176925000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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