Variant report

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869066	chr6:139777114-140639695	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	26 gene(s)	inside rSNPs	diseases
2	nsv1016532	chr6:140174639-141029988	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
3	nsv1019508	chr6:140317472-140434466	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv527772	chr6:140332096-140337443	Enhancers Flanking Active TSS Weak transcription Active TSS	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:140324800-140334000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:140324800-140338600	Weak transcription	Pancreas	Pancrea
3	chr6:140331400-140334200	Enhancers	Fetal Intestine Small	intestine
4	chr6:140331400-140334400	Enhancers	Fetal Intestine Large	intestine
5	chr6:140331600-140333400	Enhancers	Liver	Liver
6	chr6:140331600-140333800	Enhancers	Pancreatic Islets	Pancreatic Islet
7	chr6:140331800-140334600	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr6:140332000-140333400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr6:140332400-140333600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr6:140332600-140332800	Flanking Active TSS	Duodenum Mucosa	Duodenum
11	chr6:140332600-140332800	Enhancers	NHDF-Ad	bronchial
12	chr6:140332600-140333000	Enhancers	Adipose Nuclei	Adipose
13	chr6:140332600-140333000	Enhancers	Fetal Kidney	kidney
14	chr6:140332600-140333000	Enhancers	Fetal Lung	lung
15	chr6:140332600-140333000	Enhancers	Ovary	ovary
16	chr6:140332600-140333000	Enhancers	Skeletal Muscle Female	skeletal muscle
17	chr6:140332600-140333000	Enhancers	Stomach Mucosa	stomach
18	chr6:140332600-140333000	Enhancers	HepG2	liver
19	chr6:140332600-140333000	Enhancers	Monocytes-CD14+_RO01746	blood
20	chr6:140332600-140334200	Enhancers	Fetal Heart	heart

Quick Search: