Variant report

Variant rs55841602
Chromosome Location chr2:32861437-32861438
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32853600-32934600 Weak transcription Small Intestine intestine
2 chr2:32853800-32861600 Weak transcription Muscle Satellite Cultured Cells --
3 chr2:32853800-32861800 Weak transcription NH-A brain
4 chr2:32853800-32862600 Weak transcription Brain Germinal Matrix brain
5 chr2:32853800-32862600 Weak transcription Pancreas Pancrea
6 chr2:32853800-32863000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr2:32853800-32865000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr2:32853800-32865000 Weak transcription Esophagus oesophagus
9 chr2:32853800-32865200 Weak transcription Fetal Heart heart
10 chr2:32853800-32865400 Weak transcription H1 Cell Line embryonic stem cell
11 chr2:32853800-32865400 Weak transcription Brain Angular Gyrus brain
12 chr2:32853800-32866200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr2:32853800-32870200 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr2:32853800-32870800 Weak transcription H9 Cell Line embryonic stem cell
15 chr2:32853800-32872000 Weak transcription NHLF lung
16 chr2:32853800-32880800 Weak transcription Colonic Mucosa Colon
17 chr2:32853800-32881400 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr2:32853800-32883000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr2:32853800-32894000 Weak transcription Thymus Thymus
20 chr2:32854000-32877600 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr2:32854200-32861800 Weak transcription Brain Anterior Caudate brain
22 chr2:32854200-32862800 Weak transcription Brain Cingulate Gyrus brain
23 chr2:32854200-32862800 Weak transcription Right Ventricle heart
24 chr2:32854200-32880200 Weak transcription Stomach Mucosa stomach
25 chr2:32854400-32861600 Weak transcription Brain Substantia Nigra brain
26 chr2:32854400-32862000 Weak transcription Placenta Amnion Placenta Amnion
27 chr2:32854400-32862000 Weak transcription Rectal Smooth Muscle rectum
28 chr2:32854400-32865000 Weak transcription Spleen Spleen
29 chr2:32854400-32866200 Weak transcription Fetal Brain Male brain
30 chr2:32854400-32870400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr2:32854600-32864800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr2:32854800-32869800 Strong transcription Fetal Muscle Trunk muscle
33 chr2:32855000-32863200 Strong transcription HSMM muscle
34 chr2:32855000-32872400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr2:32855000-32913600 Weak transcription HMEC breast
36 chr2:32855200-32862200 Weak transcription GM12878-XiMat blood
37 chr2:32855200-32866200 Weak transcription Colon Smooth Muscle Colon
38 chr2:32855200-32867600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr2:32855200-32869600 Strong transcription Primary T cells fromperipheralblood blood
40 chr2:32855200-32870800 Strong transcription Primary T helper cells fromperipheralblood blood
41 chr2:32855200-32896400 Weak transcription NHEK skin
42 chr2:32855400-32862400 Strong transcription HUES48 Cell Line embryonic stem cell
43 chr2:32855400-32863400 Strong transcription HUES64 Cell Line embryonic stem cell
44 chr2:32855400-32870600 Strong transcription Liver Liver
45 chr2:32855600-32871000 Strong transcription Primary B cells from peripheral blood blood
46 chr2:32855600-32885600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr2:32855800-32869200 Strong transcription Primary T cells from cord blood blood
48 chr2:32855800-32869400 Strong transcription Primary T regulatory cells fromperipheralblood blood
49 chr2:32855800-32869600 Strong transcription Adipose Nuclei Adipose
50 chr2:32855800-32870200 Strong transcription Skeletal Muscle Female skeletal muscle

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