The 2.0 version of rSNPBase

Variant report

Variant rs558489644
Chromosome Location chr11:120964847-120964848
allele -/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:120910000-120966600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr11:120926200-120966200 Weak transcription NHEK skin
3 chr11:120926400-120965800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr11:120942800-120965800 Weak transcription Esophagus oesophagus
5 chr11:120942800-120972000 Weak transcription H1 Cell Line embryonic stem cell
6 chr11:120942800-120979000 Weak transcription Aorta Aorta
7 chr11:120946200-120970400 Weak transcription NH-A brain
8 chr11:120953600-120965800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr11:120956000-120971200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr11:120958200-120965400 Weak transcription Brain Anterior Caudate brain
11 chr11:120958200-120965800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr11:120958200-120965800 Weak transcription HMEC breast
13 chr11:120958200-120970200 Weak transcription Ovary ovary
14 chr11:120958200-120971200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr11:120958200-120975200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr11:120958400-120966200 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr11:120958400-120970200 Weak transcription Fetal Brain Female brain
18 chr11:120958600-120970200 Weak transcription Fetal Muscle Leg muscle
19 chr11:120958800-120970400 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr11:120958800-120971200 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr11:120958800-120980600 Weak transcription Brain Germinal Matrix brain
22 chr11:120959000-120965800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr11:120959000-120970400 Weak transcription Muscle Satellite Cultured Cells --
24 chr11:120959000-120970400 Weak transcription Fetal Lung lung
25 chr11:120959200-120970200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr11:120959200-120971200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr11:120959200-120971400 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr11:120959600-120975800 Weak transcription Brain Hippocampus Middle brain
29 chr11:120959800-120965000 Weak transcription Primary T cells from cord blood blood
30 chr11:120959800-120971000 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr11:120959800-120971200 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr11:120960000-120965800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr11:120960200-120965800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr11:120960600-120970400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr11:120962600-120971800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr11:120962600-120976000 Weak transcription HSMMtube muscle
37 chr11:120963000-120965000 Weak transcription HSMM muscle
38 chr11:120964600-120971400 Enhancers Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015