Variant report

Variant	rs558531995
Chromosome Location	chr8:102970387-102970388
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:102970055..102972345-chr8:102973060..102976868,3	MCF-7	breast:
2	chr8:102968711..102970531-chr8:102970861..102973050,2	MCF-7	breast:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018653	chr8:102818271-103009082	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv539700	chr8:102818271-103009082	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
3	nsv831411	chr8:102937991-103108140	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	nsv972563	chr8:102970051-102975959	Weak transcription Enhancers ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv2761453	chr8:102970136-102974682	Weak transcription Enhancers ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102961000-102971200	Weak transcription	Aorta	Aorta
2	chr8:102963200-102973600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr8:102965200-102970800	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr8:102965400-102971000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr8:102965400-102989800	Weak transcription	Stomach Smooth Muscle	stomach
6	chr8:102966800-102971000	Weak transcription	Right Ventricle	heart
7	chr8:102967400-102972200	Weak transcription	GM12878-XiMat	blood
8	chr8:102968600-102970400	Enhancers	Fetal Brain Male	brain
9	chr8:102968800-102970800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr8:102968800-102972200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
11	chr8:102968800-102974200	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr8:102969200-102979600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
13	chr8:102969600-102970400	Enhancers	Psoas Muscle	Psoas
14	chr8:102969600-102970800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
15	chr8:102969800-102971600	Enhancers	NHDF-Ad	bronchial
16	chr8:102969800-102971800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr8:102970000-102970400	Enhancers	Left Ventricle	heart
18	chr8:102970000-102974400	Weak transcription	Cortex derived primary cultured neurospheres	brain
19	chr8:102970200-102970400	Enhancers	Esophagus	oesophagus
20	chr8:102970200-102973800	Weak transcription	Ovary	ovary
21	chr8:102970200-102973800	Weak transcription	Rectal Smooth Muscle	rectum
22	chr8:102970200-102973800	Weak transcription	Skeletal Muscle Female	skeletal muscle

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