Variant report

Variant	rs558589662
Chromosome Location	chr2:213370555-213370556
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432024	chr2:213314899-213446726	Bivalent/Poised TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv948878	chr2:213345197-213534298	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1008463	chr2:213356335-213388695	Enhancers ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
4	nsv584423	chr2:213367273-213370734	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
5	esv3459971	chr2:213369556-213371444	Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
6	esv3459970	chr2:213370045-213371252	Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
7	esv3459972	chr2:213370045-213371252	ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
8	esv11050	chr2:213370245-213370913	Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
9	nsv584424	chr2:213370272-213370734	ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
10	nsv584425	chr2:213370272-213373521	Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:213367800-213372200	Weak transcription	Aorta	Aorta
2	chr2:213370400-213373800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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