Variant report

Variant	rs55865336
Chromosome Location	chr8:129942964-129942965
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11994519	1.00[ASN][1000 genomes]
rs16903937	1.00[ASN][1000 genomes]
rs17241908	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17242358	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs17242435	1.00[ASN][1000 genomes]
rs17820673	1.00[ASN][1000 genomes]
rs2028518	1.00[ASN][1000 genomes]
rs55658222	0.80[EUR][1000 genomes]
rs55847434	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56330003	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57256157	1.00[ASN][1000 genomes]
rs60136246	1.00[ASN][1000 genomes]
rs7013831	1.00[ASN][1000 genomes]
rs72728734	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72728736	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9693430	1.00[ASN][1000 genomes]
rs987525	0.97[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:129937400-129958800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:129941200-129947400	Weak transcription	Dnd41	blood
3	chr8:129942600-129943000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr8:129942800-129947400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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