Variant report

Variant	rs558681460
Chromosome Location	chr14:82854741-82854742
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052666	chr14:82069162-83028382	Weak transcription Active TSS Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv902123	chr14:82778603-82876504	Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases
3	nsv1051581	chr14:82829319-83051904	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:82853600-82855200	Enhancers	Brain Substantia Nigra	brain
2	chr14:82853600-82855400	Enhancers	Brain Anterior Caudate	brain
3	chr14:82853800-82855200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr14:82854000-82855400	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr14:82854200-82855000	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr14:82854200-82855400	Enhancers	Brain Cingulate Gyrus	brain
7	chr14:82854200-82856000	Enhancers	Brain Hippocampus Middle	brain
8	chr14:82854400-82855800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
9	chr14:82854400-82856200	Enhancers	Brain Inferior Temporal Lobe	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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