Variant report

Variant rs558702478
Chromosome Location chr1:220215454-220215455
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220170400-220218600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr1:220172600-220218600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:220178000-220217800 Weak transcription Pancreas Pancrea
4 chr1:220178200-220218600 Weak transcription Right Ventricle heart
5 chr1:220187200-220216800 Weak transcription Fetal Heart heart
6 chr1:220187400-220216800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:220193600-220218600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:220196400-220218200 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr1:220197200-220217800 Weak transcription Colonic Mucosa Colon
10 chr1:220199600-220216800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr1:220203400-220218600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:220205200-220216800 Weak transcription Fetal Brain Male brain
13 chr1:220205200-220218200 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr1:220206600-220217000 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr1:220206800-220218200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:220206800-220219000 Weak transcription Fetal Lung lung
17 chr1:220207600-220217000 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr1:220207600-220218200 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr1:220208000-220216400 Weak transcription NHDF-Ad bronchial
20 chr1:220208200-220216800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr1:220208200-220218200 Weak transcription Brain Substantia Nigra brain
22 chr1:220208400-220218200 Weak transcription Colon Smooth Muscle Colon
23 chr1:220208600-220218000 Weak transcription HSMM muscle
24 chr1:220208800-220218400 Weak transcription Primary hematopoietic stem cells blood
25 chr1:220210600-220218600 Weak transcription Right Atrium heart
26 chr1:220211600-220215800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:220211800-220215600 Strong transcription Fetal Stomach stomach
28 chr1:220211800-220215800 Strong transcription Fetal Intestine Small intestine
29 chr1:220212400-220217200 Weak transcription Gastric stomach
30 chr1:220212400-220218200 Weak transcription Stomach Mucosa stomach
31 chr1:220212600-220216800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr1:220212600-220216800 Strong transcription K562 blood
33 chr1:220212800-220216800 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr1:220212800-220217200 Weak transcription Small Intestine intestine
35 chr1:220212800-220218200 Weak transcription HMEC breast
36 chr1:220213400-220216200 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr1:220213400-220216800 Weak transcription Brain Angular Gyrus brain
38 chr1:220213400-220216800 Weak transcription Brain Cingulate Gyrus brain
39 chr1:220213400-220216800 Weak transcription Brain Hippocampus Middle brain
40 chr1:220213400-220216800 Weak transcription Duodenum Mucosa Duodenum
41 chr1:220213400-220216800 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr1:220213400-220216800 Weak transcription A549 lung
43 chr1:220213400-220217000 Weak transcription Muscle Satellite Cultured Cells --
44 chr1:220213400-220217000 Weak transcription Brain Germinal Matrix brain
45 chr1:220213400-220217000 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr1:220213400-220217600 Weak transcription Lung lung
47 chr1:220213400-220217800 Weak transcription Aorta Aorta
48 chr1:220213400-220218000 Weak transcription Osteobl bone
49 chr1:220213400-220218400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr1:220213400-220218600 Weak transcription Left Ventricle heart

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