Variant report

Variant rs558738188
Chromosome Location chr6:31464438-31464439
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31459400-31466600 Active TSS GM12878-XiMat blood
2 chr6:31461200-31465000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
3 chr6:31461400-31464600 Flanking Active TSS Primary B cells from cord blood blood
4 chr6:31461600-31464600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr6:31462800-31465400 Weak transcription Gastric stomach
6 chr6:31462800-31465400 Weak transcription Ovary ovary
7 chr6:31462800-31466800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
8 chr6:31463000-31464800 Weak transcription Aorta Aorta
9 chr6:31463000-31464800 Weak transcription Esophagus oesophagus
10 chr6:31463000-31464800 Weak transcription Pancreas Pancrea
11 chr6:31463000-31465000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr6:31463000-31465000 Weak transcription Right Ventricle heart
13 chr6:31463000-31465400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
14 chr6:31463200-31464600 Weak transcription A549 lung
15 chr6:31463200-31465000 Enhancers Primary T helper naive cells fromperipheralblood blood
16 chr6:31463200-31465200 Enhancers Primary T killer naive cells fromperipheralblood blood
17 chr6:31463200-31465200 Weak transcription Left Ventricle heart
18 chr6:31463200-31465200 Enhancers HSMM muscle
19 chr6:31463200-31465400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr6:31463200-31465400 Weak transcription Lung lung
21 chr6:31463200-31465400 Enhancers Spleen Spleen
22 chr6:31463200-31465800 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr6:31463200-31465800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
24 chr6:31463400-31464600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr6:31463400-31464600 Enhancers Primary T helper 17 cells PMA-I stimulated --
26 chr6:31463400-31464800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr6:31463400-31464800 Enhancers Primary T helper cells PMA-I stimulated --
28 chr6:31463400-31464800 Weak transcription Liver Liver
29 chr6:31463400-31464800 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr6:31463400-31464800 Enhancers Thymus Thymus
31 chr6:31463400-31465000 Enhancers Primary T cells from cord blood blood
32 chr6:31463400-31465000 Enhancers Primary Natural Killer cells fromperipheralblood blood
33 chr6:31463400-31465000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr6:31463400-31465000 Weak transcription Colonic Mucosa Colon
35 chr6:31463400-31465200 Weak transcription HSMMtube muscle
36 chr6:31463600-31464600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr6:31463600-31464600 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr6:31463600-31464600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
39 chr6:31463600-31464600 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr6:31463600-31464600 Enhancers Primary T killer memory cells from peripheral blood blood
41 chr6:31463600-31464600 Weak transcription Adipose Nuclei Adipose
42 chr6:31463600-31464800 Enhancers Primary B cells from peripheral blood blood
43 chr6:31463600-31465000 Enhancers Primary hematopoietic stem cells blood
44 chr6:31463600-31465000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
45 chr6:31463600-31465000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr6:31463600-31465000 Enhancers Fetal Thymus thymus
47 chr6:31463600-31465000 Weak transcription Right Atrium heart
48 chr6:31463600-31465000 Enhancers K562 blood
49 chr6:31463600-31465600 Weak transcription Small Intestine intestine
50 chr6:31463800-31464800 Enhancers Primary T helper cells fromperipheralblood blood

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