Variant report
| Variant | rs55876140 |
|---|---|
| Chromosome Location | chr6:12350213-12350214 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:12343200-12351400 | Weak transcription | Colonic Mucosa | Colon |
| 2 | chr6:12347800-12351400 | Enhancers | Fetal Intestine Small | intestine |
| 3 | chr6:12347800-12352800 | Enhancers | Fetal Intestine Large | intestine |
| 4 | chr6:12348000-12352000 | Enhancers | Stomach Mucosa | stomach |
| 5 | chr6:12348600-12351400 | Enhancers | NHEK | skin |
| 6 | chr6:12348800-12350400 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 7 | chr6:12349000-12351400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 8 | chr6:12349000-12351600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 9 | chr6:12349200-12350400 | Flanking Active TSS | A549 | lung |
| 10 | chr6:12349400-12351400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 11 | chr6:12349400-12351400 | Weak transcription | Small Intestine | intestine |
| 12 | chr6:12349400-12352000 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 13 | chr6:12349600-12350400 | Enhancers | Rectal Mucosa Donor 29 | rectum |
| 14 | chr6:12349800-12352000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 15 | chr6:12349800-12354000 | Weak transcription | HUVEC | blood vessel |
| 16 | chr6:12349800-12354000 | Weak transcription | Osteobl | bone |
| 17 | chr6:12349800-12355000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 18 | chr6:12350000-12353800 | ZNF genes & repeats | ES-I3 Cell Line | embryonic stem cell |
| 19 | chr6:12350000-12355000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 20 | chr6:12350200-12351200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
