Variant report

Variant rs558802915
Chromosome Location chr4:3443214-3443215
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:3417200-3444800 Weak transcription Primary hematopoietic stem cells blood
2 chr4:3419200-3444600 Weak transcription Primary monocytes fromperipheralblood blood
3 chr4:3430800-3445200 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr4:3431800-3444600 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr4:3433000-3445200 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr4:3433200-3444800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr4:3433600-3444600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr4:3436400-3444400 Weak transcription Primary T cells from cord blood blood
9 chr4:3436400-3444400 Weak transcription Stomach Smooth Muscle stomach
10 chr4:3436400-3445200 Weak transcription Fetal Intestine Small intestine
11 chr4:3436600-3449000 Weak transcription Fetal Brain Female brain
12 chr4:3436800-3445400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr4:3437000-3450000 Weak transcription Brain Germinal Matrix brain
14 chr4:3437200-3451200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr4:3438000-3448000 Weak transcription Right Ventricle heart
16 chr4:3438600-3444800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr4:3438800-3445400 Weak transcription Gastric stomach
18 chr4:3439000-3445400 Weak transcription Pancreas Pancrea
19 chr4:3439200-3445400 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr4:3440400-3445200 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr4:3441400-3443800 Enhancers A549 lung
22 chr4:3441600-3443400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
23 chr4:3442400-3445600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr4:3442600-3443400 Enhancers Liver Liver
25 chr4:3442600-3443400 Bivalent Enhancer Placenta Placenta
26 chr4:3442600-3444200 Bivalent Enhancer Fetal Muscle Trunk muscle
27 chr4:3442800-3443600 Flanking Active TSS HepG2 liver
28 chr4:3442800-3445000 Weak transcription HMEC breast
29 chr4:3443000-3443400 Enhancers Spleen Spleen
30 chr4:3443000-3445200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr4:3443000-3446600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr4:3443200-3443400 Enhancers Brain Substantia Nigra brain
33 chr4:3443200-3443400 Weak transcription Duodenum Mucosa Duodenum
34 chr4:3443200-3443600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr4:3443200-3444200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
36 chr4:3443200-3444800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr4:3443200-3450600 Weak transcription Esophagus oesophagus
38 chr4:3443200-3451400 Weak transcription Fetal Lung lung

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