Variant report

Variant rs55880764
Chromosome Location chr20:25215721-25215722
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25204200-25222800 Weak transcription HUES64 Cell Line embryonic stem cell
2 chr20:25204400-25218200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr20:25206800-25218200 Weak transcription HUES6 Cell Line embryonic stem cell
4 chr20:25207800-25218200 Weak transcription Spleen Spleen
5 chr20:25207800-25218200 Weak transcription Dnd41 blood
6 chr20:25208600-25218200 Weak transcription Brain Cingulate Gyrus brain
7 chr20:25209200-25218200 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr20:25210800-25218200 Weak transcription Lung lung
9 chr20:25210800-25218400 Weak transcription Brain Hippocampus Middle brain
10 chr20:25211200-25217600 Weak transcription Aorta Aorta
11 chr20:25211200-25218600 Weak transcription Brain Anterior Caudate brain
12 chr20:25212000-25218400 Weak transcription Colon Smooth Muscle Colon
13 chr20:25213200-25221800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr20:25213400-25222200 Enhancers HMEC breast
15 chr20:25213600-25216000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr20:25213600-25222200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr20:25213800-25220200 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr20:25214000-25215800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr20:25214200-25215800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr20:25214200-25218200 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr20:25214200-25218800 Enhancers Muscle Satellite Cultured Cells --
22 chr20:25214200-25220800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr20:25214400-25216600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr20:25214400-25216600 Weak transcription Gastric stomach
25 chr20:25214400-25217000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr20:25214400-25217000 Weak transcription Placenta Amnion Placenta Amnion
27 chr20:25214400-25217000 Weak transcription HSMMtube muscle
28 chr20:25214400-25217400 Weak transcription Pancreas Pancrea
29 chr20:25214400-25218000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr20:25214400-25218000 Weak transcription Psoas Muscle Psoas
31 chr20:25214400-25218000 Weak transcription Right Ventricle heart
32 chr20:25214400-25218000 Weak transcription Stomach Smooth Muscle stomach
33 chr20:25214400-25218200 Weak transcription Left Ventricle heart
34 chr20:25214400-25218200 Weak transcription Ovary ovary
35 chr20:25214400-25218400 Enhancers NHEK skin
36 chr20:25214400-25219400 Enhancers Stomach Mucosa stomach
37 chr20:25214400-25223000 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr20:25214600-25217200 Weak transcription NH-A brain
39 chr20:25214600-25218200 Weak transcription HUVEC blood vessel
40 chr20:25215200-25215800 Enhancers Fetal Heart heart
41 chr20:25215200-25218000 Enhancers Hela-S3 cervix
42 chr20:25215200-25218800 Enhancers Osteobl bone
43 chr20:25215200-25221800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr20:25215400-25215800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr20:25215400-25215800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr20:25215400-25215800 Enhancers Colonic Mucosa Colon
47 chr20:25215400-25215800 Enhancers Esophagus oesophagus
48 chr20:25215400-25215800 Enhancers Fetal Kidney kidney
49 chr20:25215400-25215800 Flanking Active TSS A549 lung
50 chr20:25215400-25215800 Bivalent Enhancer HepG2 liver

Quick Search:


  
Input of quick search could be:

what's new

Quick links