The 2.0 version of rSNPBase

Variant report

Variant rs558828610
Chromosome Location chr1:172808884-172808885
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:15 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172796000-172813800 Weak transcription Small Intestine intestine
2 chr1:172806800-172809400 Enhancers Primary T helper cells fromperipheralblood blood
3 chr1:172808200-172813600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:172808200-172813800 Weak transcription Primary T cells from cord blood blood
5 chr1:172808200-172813800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr1:172808200-172814600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:172808400-172809400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr1:172808400-172813600 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr1:172808400-172813600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr1:172808400-172813800 Weak transcription Dnd41 blood
11 chr1:172808800-172810000 Weak transcription HMEC breast
12 chr1:172808800-172813600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr1:172808800-172813600 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr1:172808800-172813800 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr1:172808800-172814400 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015