The 2.0 version of rSNPBase

Variant report

Variant rs558863146
Chromosome Location chr9:26849644-26849645
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:26822200-26889400 Weak transcription Psoas Muscle Psoas
2 chr9:26830200-26865400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr9:26832200-26866800 Weak transcription Gastric stomach
4 chr9:26832200-26878400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr9:26834000-26882400 Weak transcription HUVEC blood vessel
6 chr9:26834200-26849800 Weak transcription Fetal Thymus thymus
7 chr9:26834200-26852800 Weak transcription Fetal Muscle Trunk muscle
8 chr9:26834200-26852800 Weak transcription HSMMtube muscle
9 chr9:26834200-26853400 Weak transcription Fetal Muscle Leg muscle
10 chr9:26834200-26854800 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr9:26834200-26855000 Weak transcription Ovary ovary
12 chr9:26834200-26858800 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr9:26834200-26859000 Weak transcription Fetal Kidney kidney
14 chr9:26834200-26870600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr9:26834200-26878400 Weak transcription Brain Angular Gyrus brain
16 chr9:26834200-26878600 Weak transcription Spleen Spleen
17 chr9:26834200-26880200 Weak transcription Lung lung
18 chr9:26834200-26880200 Weak transcription NHEK skin
19 chr9:26834200-26882200 Weak transcription HMEC breast
20 chr9:26834200-26888200 Weak transcription Muscle Satellite Cultured Cells --
21 chr9:26834200-26891200 Weak transcription NHDF-Ad bronchial
22 chr9:26834400-26854800 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr9:26836200-26854200 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr9:26836400-26855000 Weak transcription Brain Hippocampus Middle brain
25 chr9:26836400-26859000 Weak transcription Fetal Brain Male brain
26 chr9:26836400-26879600 Weak transcription Esophagus oesophagus
27 chr9:26836600-26891400 Weak transcription Brain Substantia Nigra brain
28 chr9:26837400-26855200 Weak transcription Brain Inferior Temporal Lobe brain
29 chr9:26837800-26855800 Weak transcription Osteobl bone
30 chr9:26838000-26878200 Weak transcription Brain Germinal Matrix brain
31 chr9:26838200-26853000 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr9:26838200-26858800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr9:26838200-26879600 Weak transcription Pancreas Pancrea
34 chr9:26838400-26852800 Weak transcription Aorta Aorta
35 chr9:26838600-26854600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr9:26838800-26852800 Weak transcription H9 Cell Line embryonic stem cell
37 chr9:26838800-26852800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr9:26839000-26858600 Weak transcription Small Intestine intestine
39 chr9:26839400-26855600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr9:26839600-26854600 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr9:26839600-26855000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr9:26840600-26859000 Weak transcription Fetal Brain Female brain
43 chr9:26840600-26882400 Weak transcription Brain Cingulate Gyrus brain
44 chr9:26840800-26855200 Weak transcription Fetal Lung lung
45 chr9:26840800-26855600 Weak transcription Brain Anterior Caudate brain
46 chr9:26840800-26865400 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr9:26840800-26879800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr9:26841000-26850600 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr9:26841000-26852600 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr9:26841000-26855600 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015