Variant report

Variant	rs55886435
Chromosome Location	chr8:102696889-102696890
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3401576	chr8:102640273-102724495	Weak transcription Genic enhancers Enhancers Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
2	esv3347346	chr8:102695962-102697982	Weak transcription Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102670800-102699000	Weak transcription	Right Ventricle	heart
2	chr8:102680000-102698000	Weak transcription	Stomach Smooth Muscle	stomach
3	chr8:102683200-102702000	Weak transcription	Fetal Lung	lung
4	chr8:102685600-102698000	Weak transcription	Aorta	Aorta
5	chr8:102688600-102697800	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr8:102690200-102697800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr8:102690200-102697800	Weak transcription	Fetal Muscle Leg	muscle
8	chr8:102690200-102698000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr8:102690200-102698000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr8:102696000-102697800	Weak transcription	Fetal Muscle Trunk	muscle
11	chr8:102696200-102698000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr8:102696200-102701600	Weak transcription	Gastric	stomach
13	chr8:102696400-102698000	Weak transcription	Liver	Liver
14	chr8:102696400-102698000	Weak transcription	Left Ventricle	heart
15	chr8:102696400-102699600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr8:102696400-102701000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
17	chr8:102696600-102697800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr8:102696600-102698200	Weak transcription	Primary T cells from cord blood	blood
19	chr8:102696600-102698200	Weak transcription	Duodenum Smooth Muscle	Duodenum
20	chr8:102696600-102704600	Weak transcription	Brain Inferior Temporal Lobe	brain
21	chr8:102696600-102708400	Weak transcription	Pancreatic Islets	Pancreatic Islet
22	chr8:102696800-102699200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr8:102696800-102701800	Weak transcription	Fetal Intestine Large	intestine
24	chr8:102696800-102701800	Weak transcription	Fetal Intestine Small	intestine
25	chr8:102696800-102701800	Weak transcription	Right Atrium	heart
26	chr8:102696800-102702000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr8:102696800-102702000	Weak transcription	Rectal Smooth Muscle	rectum

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