Variant report

Variant rs558913642
Chromosome Location chr11:71163123-71163124
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:71160600-71163400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr11:71160600-71163400 Weak transcription Placenta Amnion Placenta Amnion
3 chr11:71160600-71163400 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr11:71160600-71163400 Weak transcription HSMMtube muscle
5 chr11:71160800-71163200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr11:71160800-71163200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr11:71160800-71163400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr11:71160800-71163400 Enhancers Cortex derived primary cultured neurospheres brain
9 chr11:71160800-71163400 Enhancers Fetal Intestine Small intestine
10 chr11:71160800-71163400 Weak transcription Ovary ovary
11 chr11:71160800-71163600 Weak transcription Aorta Aorta
12 chr11:71161000-71163200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr11:71161000-71163200 Enhancers Primary T helper 17 cells PMA-I stimulated --
14 chr11:71161000-71163200 Enhancers NHEK skin
15 chr11:71161000-71163400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr11:71161000-71163400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr11:71161000-71163400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr11:71161000-71163400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
19 chr11:71161200-71163200 Weak transcription HSMM muscle
20 chr11:71161200-71163200 Weak transcription NHLF lung
21 chr11:71161200-71163400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr11:71161200-71163400 Weak transcription A549 lung
23 chr11:71161200-71163400 Enhancers Hela-S3 cervix
24 chr11:71161200-71163400 Weak transcription NH-A brain
25 chr11:71161400-71163200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr11:71161400-71163200 Enhancers HUVEC blood vessel
27 chr11:71161400-71163400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr11:71161400-71163600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
29 chr11:71161600-71164000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
30 chr11:71161800-71163200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr11:71161800-71163200 Enhancers Liver Liver
32 chr11:71162000-71163400 Enhancers Fetal Brain Male brain
33 chr11:71162200-71163800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
34 chr11:71162200-71163800 Flanking Active TSS Dnd41 blood
35 chr11:71162400-71163200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
36 chr11:71162400-71163200 Enhancers Fetal Muscle Leg muscle
37 chr11:71162400-71163200 Enhancers Fetal Thymus thymus
38 chr11:71162400-71163400 Enhancers Primary monocytes fromperipheralblood blood
39 chr11:71162400-71163400 Enhancers Primary Natural Killer cells fromperipheralblood blood
40 chr11:71162400-71163400 Enhancers Fetal Lung lung
41 chr11:71162400-71163800 Enhancers Spleen Spleen
42 chr11:71162400-71163800 Flanking Active TSS GM12878-XiMat blood
43 chr11:71162600-71163200 Enhancers Fetal Kidney kidney
44 chr11:71162600-71163200 Enhancers Skeletal Muscle Female skeletal muscle
45 chr11:71162600-71163200 Enhancers Osteobl bone
46 chr11:71162600-71163400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
47 chr11:71162600-71163400 Enhancers Lung lung
48 chr11:71162600-71163400 Enhancers NHDF-Ad bronchial
49 chr11:71162600-71163600 Flanking Active TSS HUES6 Cell Line embryonic stem cell
50 chr11:71162600-71163600 Flanking Active TSS Brain Anterior Caudate brain

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