Variant report

Variant	rs55905944
Chromosome Location	chr7:151007903-151007904
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1076581	0.86[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs17705372	0.86[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs17705456	0.86[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs56129893	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56296701	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73171816	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73171819	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73171820	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:151001000-151008200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr7:151002200-151008400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr7:151002600-151010600	Weak transcription	Right Atrium	heart
4	chr7:151006200-151008400	Weak transcription	Spleen	Spleen
5	chr7:151006600-151010600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr7:151006800-151008400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr7:151006800-151010000	Weak transcription	Fetal Lung	lung
8	chr7:151006800-151010800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr7:151006800-151010800	Weak transcription	NHDF-Ad	bronchial
10	chr7:151007000-151010600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr7:151007800-151008000	Enhancers	Placenta	Placenta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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