Variant report

Variant	rs559074220
Chromosome Location	chr14:70955028-70955029
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv565042	chr14:70951234-71011734	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv1050615	chr14:70954149-71013235	Weak transcription ZNF genes & repeats Strong transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	esv2763072	chr14:70954149-71013247	Strong transcription ZNF genes & repeats Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70910600-70955600	Weak transcription	Left Ventricle	heart
2	chr14:70949000-70956000	Weak transcription	Primary T helper cells PMA-I stimulated	--
3	chr14:70949200-70956400	Weak transcription	Primary T cells fromperipheralblood	blood
4	chr14:70949400-70956200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
5	chr14:70951200-70956200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
6	chr14:70951400-70957600	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr14:70954200-70956000	Weak transcription	Liver	Liver
8	chr14:70954400-70957400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
9	chr14:70954800-70956400	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr14:70954800-70958600	ZNF genes & repeats	Lung	lung
11	chr14:70954800-70958800	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
12	chr14:70955000-70955200	ZNF genes & repeats	Stomach Smooth Muscle	stomach
13	chr14:70955000-70955600	Weak transcription	Brain Cingulate Gyrus	brain
14	chr14:70955000-70957800	Weak transcription	HSMMtube	muscle
15	chr14:70955000-70958600	ZNF genes & repeats	Aorta	Aorta
16	chr14:70955000-70959200	ZNF genes & repeats	Adipose Nuclei	Adipose

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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